Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0204 ATGCCAACTGACACGTCATCAGTTTCCGGCGAAATCGTGTGTGTGACCGGTGCCGGCGGTTTCATAGCCTCTTGGCTTGTCAAACTTCTCTTAGAGAAAGGCTACACTGTGAGAGGAACCGTGAGAAATCCAGATGATCCGAAGAATGGTCATTTGAAAGAGTTGGAAGGAGGCAAGGAGAGGCTAACTCTGCATAAAGTTGATCTCTTCGATATTGCCTCCATTAAAGCAGCTCTTCACGGTTGCCACGGTGTCTTCCACACCGCTTCTCCGGTCACCGACAACCCTGAAGAGATGGTGGAGCCAGCAGTGAAAGGAACGAAGAATGTGATCATAGCAGCAGCAGAAGCAAAAGTGCGACGCGTGGTGTTCACTTCTTCAATTGGCACCGTCTATATGGACCCCAATACGAGTAGGGATGCGTTGGTTGATGAATCATTCTGGAGTGACTTGGAGTACTGTAAAAACACCAAGAATTGGTATTGCTACGGGAAGACGGTGGCTGAACAAGCAGCATGGGATGTAGCAAAAGAGAGAGGGGTGGACTTGGTTGTGGTGAACCCAGTTTTGGTGATTGGACCATTGTTGCAACCAACCATTAATGCTAGTACAATTCACATCCTAAAGTACCTTACTGGCTCTGCCAAAACTTATGTAAATGCCACTCAGGCTTACGTACATGTGAGGGATGTGGCATTAGCCCACATTCTTGTTTATGAGACACCTTCAGCTTCTGGTCGATTCATATGTGCTGAAAGCTCGCTGCATCGTGGTGAGCTAGTTGAAATTTTGGCCAAGTTTTTCCCCGAGTACCCAATTCCTACCAAATGTTCAGATGAAAAGAACCCGAGAGTAAAACCCTACATATTTTCAAATCAAAAGCTGAAAGATTTGGGATTGGAATTCACCCCAGTGAAGCAGTGTCTATATGACACCGTTAAAAATCTGCAAGAGAATGGCCACCTTCCTGTCCCCCCAAAGCAAAAAGATTCCTATTGA 999 0.4625 MPTDTSSVSGEIVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPDDPKNGHLKELEGGKERLTLHKVDLFDIASIKAALHGCHGVFHTASPVTDNPEEMVEPAVKGTKNVIIAAAEAKVRRVVFTSSIGTVYMDPNTSRDALVDESFWSDLEYCKNTKNWYCYGKTVAEQAAWDVAKERGVDLVVVNPVLVIGPLLQPTINASTIHILKYLTGSAKTYVNATQAYVHVRDVALAHILVYETPSASGRFICAESSLHRGELVEILAKFFPEYPIPTKCSDEKNPRVKPYIFSNQKLKDLGLEFTPVKQCLYDTVKNLQENGHLPVPPKQKDSY* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0204 332 CDD FR_SDR_e 13 300 - -
Gso7g0204 332 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 316 IPR036291 -
Gso7g0204 332 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 325 - -
Gso7g0204 332 Pfam NAD dependent epimerase/dehydratase family 13 244 IPR001509 -
Gso7g0204 332 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 7 325 - -
Gso7g0204 332 Gene3D - 11 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0204 Gso-Chr7 1835375 1838392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0204 8 276 Monolignol Biosynthesis Gene Families AT1G80820 73.606 1.84e-142 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0204 K09753 - gmx:100811528 666.381