Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0203 ATGACTGTGACAGGTTCATCATCTGGGCAACCTCAATTCATTGCCAGCACCGGTGGTAACCGGAACTTCTCGAATGCACCCTTGATTGAAAACTCAGATACTGATCAAATTGTTGTACCTGATACAACAGGCTGGAAAAACCTATTTGCATACGTGGGACCTGGATTTCTAGTTTCCATTGCATATATCGACCCGGGAAACTTTGAGACAGATCTTCAATCAGGAGCGCAATATAAATATGAGTTACTTTGGATCATATTGGTGGCGTCATGTGCTGCACTTCTAATTCAAACAATGGCAGCTAATCTTGGGGTTGTCACTGGAATGCACCTAGCAGAGCATTGTAAAGCTGAATATTCTCGGGTGCCCAACTTTATCCTTTGGGTGATTGCTGAAATTGCCATAGTGGCGTGTGACATTCCTGAAGTAATTGGGACAGCCTTTGCATTGAACATGCTCTTCAACATACCAGTTTGGGTTGGTGTTCTTCTGACAGGATTCAGTACATTGATCCTCTTAGCATTACAGCAATATGGGGTTAGGAAACTTGAATTCTTCATTGCATTTCTAGTATTCACAATTGCTGGTTGCTTTATGGCTGAGCTTGGATATGCAAAGCCGGTGGCCAAAGAAGTTGTGGCCGGTCTTTTTGTTCCAAAACTTCAGGGGCATGGTGCCACTGGTCTTGCAATTTCACTCCTTGGGGCAATGGTTATGCCCCACAATCTATTCCTCCACTCAGCACTGGTGCTTTCCAGGAAAATACCGCGATCAGTTCGTGGAATCAAAGAGGCCTGTAGATTTTACATGATAGAAAGTGCCTTTGCTCTTACGGTGGCCTTCCTCATAAATATTTCTGTTATTTCTGTAAGTGGTGCAGTATGCAATTCTTCAAATTTAAGTGTTGAAGATCAGAATAGCTGTCAGGATTTGGATTTGAACAAGGCCTCCTTTTTATTAAGAAATGTCTTGGGCAAATGGAGCTCAAAACTATTTGCAATTGCTTTACTTGCCTCAGGTCAAAGTTCTACCATAACAGGAACATATGCAGGACAATACGTCATGCAGGGATTTCTTGATTTGCGACTGAAGTCATGGATTCGGAATCTGCTAACTCGTTGCTTAGCCATTGTTCCTAGTTTGATTGTTGCACTCATTGGTGGCTCTGCTGGAGCTGGGGAGCTCATCATAATTGCATCGATGATCTTATCATTTGAGCTTCCTTTTGCTTTGATTCCACTCCTCAAGTTCACTAGCAGCAAAATCAAGATGGGAGAACATGTCAACTCAATCTCGATCTCGGCTGTTACTTGGATCATTGGTTCCCTCATCATGGGCATAAATATATACTATTTATTGACTAGCTTTGTCAAATTGCTTCTGCATGTCCACTTAAAAATTGTTACTAAGGTGTTTCTCGGGATATTGGGATTTTCGGGTGTGGCACTATATATGGGAGGCATTGCGTATCTAGTGTTTCGCAAAAATAAAAAAACTACACACATTTTGGCATTTAGAACATTGGAAGAACAACAAGTGGCAAATGAACAAGGTGATATATCAATTTATAGTCTCCCAAGAGAAGACATAGTAAGCATGCAATTGCCTCAAAAAAGGAGTCCAGCAGAAATTGATTGA 1638 0.4158 MTVTGSSSGQPQFIASTGGNRNFSNAPLIENSDTDQIVVPDTTGWKNLFAYVGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALLIQTMAANLGVVTGMHLAEHCKAEYSRVPNFILWVIAEIAIVACDIPEVIGTAFALNMLFNIPVWVGVLLTGFSTLILLALQQYGVRKLEFFIAFLVFTIAGCFMAELGYAKPVAKEVVAGLFVPKLQGHGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEACRFYMIESAFALTVAFLINISVISVSGAVCNSSNLSVEDQNSCQDLDLNKASFLLRNVLGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLKSWIRNLLTRCLAIVPSLIVALIGGSAGAGELIIIASMILSFELPFALIPLLKFTSSKIKMGEHVNSISISAVTWIIGSLIMGINIYYLLTSFVKLLLHVHLKIVTKVFLGILGFSGVALYMGGIAYLVFRKNKKTTHILAFRTLEEQQVANEQGDISIYSLPREDIVSMQLPQKRSPAEID* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0203 545 Hamap Divalent metal cation transporter MntH [mntH]. 32 456 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso7g0203 545 PRINTS Natural resistance-associated macrophage protein signature 127 153 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso7g0203 545 PRINTS Natural resistance-associated macrophage protein signature 155 174 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso7g0203 545 PRINTS Natural resistance-associated macrophage protein signature 180 201 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso7g0203 545 PRINTS Natural resistance-associated macrophage protein signature 230 253 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso7g0203 545 PRINTS Natural resistance-associated macrophage protein signature 340 359 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso7g0203 545 PRINTS Natural resistance-associated macrophage protein signature 368 385 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso7g0203 545 PRINTS Natural resistance-associated macrophage protein signature 400 419 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso7g0203 545 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 12 545 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso7g0203 545 PANTHER METAL TRANSPORTER NRAMP1 12 545 - -
Gso7g0203 545 Pfam Natural resistance-associated macrophage protein 68 430 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gso7g0203 545 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 47 422 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0203 Gso-Chr7 1826150 1834384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0203 1 545 Inorganic Solute Cotransporters AT1G80830 76.330 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0203 K21398 - gmx:100815628 1053.51