Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0200 ATGGATTGTTCATCATGGATTAACACTTCCTTGGATCTCAACATTAATCCCCGCAGAGTTCATGAAGAAGTTCCCAAGGAGGTAGAAAGCGAGCTTTTCTCTTTGGGAATGACCAAGTTTAACGTGGAAGAAGAGTCTACTAGTGACTTGGAGGAGGAACTGAAGCGGGTGACTGCAGAAAACAAGAAGTTGGCCGAAATGCTCTCAGTGGTGTGTGAGAACTACAACACTTTGAGAAACCATTTGATGGAATGCATGAGGAAAAATGGTGAAAAGGAGGTCAGCCCAACATCAAAGAAAAGAAAGTCTGAAAGCAGCAACAACAATAGTAATTTGATGGGAACTAACAATGGAAACTCAGAGAGCAGTTCTACTGATGAAGAATCTTGCAAGAAACCAAGGGAAGAAATCATCAAAGCAAAAATTTCAAGAGTTTATGTCAGGACTGAAGCATCTGATACTAGCCTTATTGTTAAAGATGGATACCAATGGAGGAAATATGGGCAAAAGGTGACCAGAGATAACCCTTGTCCTAGAGCATATTTCAAGTGCTCTTTTGCTCCTAGCTGCCCTGTCAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAATCTGTTCTGGTTGCTACTTATGAAGGGGAGCACAATCATCCTCAGTTTTCTTCCCAGATGGAAGCAACATCAGGTTCTGGCCGTAGTGTGACCCTTGGTTCAGTGCCCTGTACCGCATCTCTCAGCACTTCAACACCAACACTTGTTACCCTTGACTTGACAAAATCTCAGGGAAGCAACGATTCCAAGAGCACAAAGCCTAAAGGAGATTCACCTAAAGTACCTCAGGTTTTGGTGGAACAGATGGCTACTTCTTTGACCACGGATCCTAATTTTAGAGCAGCACTTGTTGCTGCCATCTCAGGAAGATTGTTGCACAATAATTAA 936 0.4274 MDCSSWINTSLDLNINPRRVHEEVPKEVESELFSLGMTKFNVEEESTSDLEEELKRVTAENKKLAEMLSVVCENYNTLRNHLMECMRKNGEKEVSPTSKKRKSESSNNNSNLMGTNNGNSESSSTDEESCKKPREEIIKAKISRVYVRTEASDTSLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHPQFSSQMEATSGSGRSVTLGSVPCTASLSTSTPTLVTLDLTKSQGSNDSKSTKPKGDSPKVPQVLVEQMATSLTTDPNFRAALVAAISGRLLHNN* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0200 311 MobiDBLite consensus disorder prediction 257 278 - -
Gso7g0200 311 Gene3D WRKY domain 141 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso7g0200 311 SUPERFAMILY WRKY DNA-binding domain 155 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso7g0200 311 MobiDBLite consensus disorder prediction 88 132 - -
Gso7g0200 311 MobiDBLite consensus disorder prediction 101 124 - -
Gso7g0200 311 Coils Coil 40 67 - -
Gso7g0200 311 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 311 IPR044810 GO:0003700
Gso7g0200 311 SMART WRKY_cls 158 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso7g0200 311 Pfam WRKY DNA -binding domain 159 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso7g0200 311 PANTHER TRANSCRIPTION FACTOR 1 311 - -
Gso7g0200 311 ProSiteProfiles WRKY domain profile. 153 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0200 Gso-Chr7 1781923 1784262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0200 4 311 WRKY Transcription Factor Family AT1G80840 52.960 1.65e-97 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso7g0200 WRKY 3.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0200 - - gmx:100807966 567