Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0193 ATGTTTGAATCTAGTTACAAGTCACAGTATATTGGAGGCCAGAAGGAGAAGTTCGTAAGGTTGGATGATCTGGATTCGAATTGTTCTATGCCATCAAGCTCAAGGGGGATGAAAAAATTAAGATTCAATTTAGATTCTCTGCCTATTCCTCTTCCTGGTCGTGGAAGAAAAAGAGCATCGAAATCATTTAGGCTAGGAATGAAGAAGAGTTCAGATGGACTAAAGACATTTGGAAGATCACTAAAGACTGGAGTGACTACTTGGGCAGTGTTCCCAGAAGATCTTAAAGTGTCTGAGAAAAAAGTATTTGATCCTCAAGATAAGAACCTTCTTTATTGGAACAAGTTTTTTGAGATTCTGTGCATTGTTTCTATAGCATGCGATCCCTTCTTCTTTTACCTTCCTTATTTCAACCACAAATCATTTTGCCTCGCCATAGATAACAGCCTAGCAAGTTTTGCTGTCACAATGAGAACAATATGTGATTTCATTTATCTCCTCCGCATAAGTTTTCAATTCCGCACCGCCTACATTGCGCCTTCATCTCGGGTATTTGGACGAGGTGAACTTGTTATAGATCCTAGAAAGATTGCCAAGAGATATTTAAAACGTTACTTCATCATTGACTTCATTTCTGTGTTGCCTATGCCACAGATTGTAGTGTGGAAATATCTTTACAGATCAGGACGTGTAGAGGTATTGGAAACAAAAACATCAATGTTGAGAATTGTGATCCTGCAATATTTTCCAAGATTTCTACGCTTTTTACCTTTAGCTTCAGAAGTTAAAAAGACAGCAGGTGTTTTCTCTGAGAACGCATTGCTCGGTGCCATGTACTATTTGATCTGGTATATGCTTGCTAGTCATATAACTGGGTCTGTCTGGTACTTACTAGCCATTGAACGTAATGGCACCTGCTGGAAGGATGCTTGTAAAGAAGTTGAAGGATGCAATACACATTTCTTGTACTGTGGGAATTCGAACAAGCATAGGTCAGGGTATGATACTTGGAGAAATATCAGCGAGACTGTTCTGAGAAGTCGTTGCTTTGTTGAAGGTGATGCCTCAGAATTTAACTATGGAATCTTCTCTCAAGCTATACAGTCTGATATTGTTGCCTCCGTAGAAGTTTTTCCTAAATTCTGTTACTGTTTGTGGTGGGGCCTTCAAAACTTGAGTACACTTGGTCAGGGGCTTCTAACCAGTACCTACCCTGGAGAGGTTATGTTTTCCATTGTAATAGCTATTATGGGACTTATCCTTTTTGCTCTTCTGATTGGAAACATGCAGACCTACCTTCAATCAATGTCAGTTCGTCTTGAGGAAATGAGGATCCAAAGACGTGACTCTGAGCAGTGGATGCATCATCGCTTGCTTCCTCCGGAGCTAAGGGAAAGAGTGAGACGCTATGAGCAATACAAGTGGCTGAACACCCGAGGTGTAGATGAAGAGAGCTTAGTTCAGAGTCTTCCAAAAGATCTCCGGAGAGATATCAAAAGGCATCTTTGTTTGAATTTAGTCAGAAGGGTTCCTCTCTTTGCCAACATGGATGAACGTTTGCTTGATGCTATATGTGAGCGATTGAAGCCTAGTTTATATACAGAGGGCACTTACATAGTGAGGGAAGGAGACCCAGTTAATGAGATGCATTTCATCATACGTGGGCGTTTAGAGAGTGTTACTACAGATGGTGGAAGAAGTGGATTTTTCAACAGAGGTCTTCTGAAGGAAGCTGACTTTTGTGGAGAAGAGCTACTAACATGGGCATTGGACCCCAAATCTGCTGCTAGCTTGCCAACATCCACAAGGACAGTGAAAGCTATAAATGAGGTGGAAGCATTTGCTTTGGAAGCAGAGGAGTTGAAGTTTGTTGCTTCCCAGTTTAGGCACATTCGCAGCAGACAGGTTCAGCACACCTTCCGTTTCTATTCGCAGCAGTGGAGAACGTGGGCTGCTATCTACATTCAAGCTGCGTGGAGGAGGCATTGCAGGAGAAAGATTGCAGAACATCGCAGGAGGGAGGAAGAAGAATTCTGTGACTCTGATTATGAAAACAGTGATGATTCAGCAAAGGCCTTGGTCAGGCATAGAGATACTTCTTTTTCCTCTTCTAAGCCTGGACTTGGAACAACCATCTACGCTTCTCGCTTTGCTGCTAATGCTCTTCGTGGTCATAGGCTTTGTGATTCAAGTTCGAGGGAGATGATCAAACTTCAAAAGCCCCCGGAACCTGACTTTGGTGATATTGATGATAACTGA 2259 0.4205 MFESSYKSQYIGGQKEKFVRLDDLDSNCSMPSSSRGMKKLRFNLDSLPIPLPGRGRKRASKSFRLGMKKSSDGLKTFGRSLKTGVTTWAVFPEDLKVSEKKVFDPQDKNLLYWNKFFEILCIVSIACDPFFFYLPYFNHKSFCLAIDNSLASFAVTMRTICDFIYLLRISFQFRTAYIAPSSRVFGRGELVIDPRKIAKRYLKRYFIIDFISVLPMPQIVVWKYLYRSGRVEVLETKTSMLRIVILQYFPRFLRFLPLASEVKKTAGVFSENALLGAMYYLIWYMLASHITGSVWYLLAIERNGTCWKDACKEVEGCNTHFLYCGNSNKHRSGYDTWRNISETVLRSRCFVEGDASEFNYGIFSQAIQSDIVASVEVFPKFCYCLWWGLQNLSTLGQGLLTSTYPGEVMFSIVIAIMGLILFALLIGNMQTYLQSMSVRLEEMRIQRRDSEQWMHHRLLPPELRERVRRYEQYKWLNTRGVDEESLVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTEGTYIVREGDPVNEMHFIIRGRLESVTTDGGRSGFFNRGLLKEADFCGEELLTWALDPKSAASLPTSTRTVKAINEVEAFALEAEELKFVASQFRHIRSRQVQHTFRFYSQQWRTWAAIYIQAAWRRHCRRKIAEHRRREEEEFCDSDYENSDDSAKALVRHRDTSFSSSKPGLGTTIYASRFAANALRGHRLCDSSSREMIKLQKPPEPDFGDIDDN* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0193 752 CDD CAP_ED 512 643 IPR000595 -
Gso7g0193 752 Pfam Cyclic nucleotide-binding domain 533 622 IPR000595 -
Gso7g0193 752 MobiDBLite consensus disorder prediction 733 752 - -
Gso7g0193 752 Gene3D Jelly Rolls 510 630 IPR014710 -
Gso7g0193 752 SMART cnmp_10 512 643 IPR000595 -
Gso7g0193 752 Pfam Ion transport protein 112 439 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gso7g0193 752 Gene3D - 113 437 - -
Gso7g0193 752 ProSiteProfiles cAMP/cGMP binding motif profile. 512 642 IPR000595 -
Gso7g0193 752 SUPERFAMILY Voltage-gated potassium channels 105 434 - -
Gso7g0193 752 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 8-RELATED 12 748 - -
Gso7g0193 752 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 12 748 - -
Gso7g0193 752 SUPERFAMILY cAMP-binding domain-like 442 632 IPR018490 -
Gso7g0193 752 Gene3D Helix hairpin bin 439 503 - -
Gso7g0193 752 ProSiteProfiles IQ motif profile. 648 677 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0193 Gso-Chr7 1743064 1747494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0193 6 746 Ion Channels AT1G15990 67.154 0.0 994
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0193 K05391 - gmx:100810453 1501.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0193 7 1743064 1747494 Gso7g0193 7 1743064 1747494 ECH