Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0181 ATGGAAAAGTACGAGAAGCTGGAGAAGGTGGGAGAAGGAACATACGGGAAAGTGTACAAGGCTCGGGAGAAGGCGAGTGGGAGCCTGGTGGCTCTGAAGAAGACGCGTCTGGAGATGGACGAGGAGGGTGTCCCTCCCACCGCACTACGCGAGGTGTCTCTCCTTCAGCTTCTCTCCCAATCCATCTACATCGTCCGCCTCCTCTCCGTCGAACACGTCGACAAGGTCCCCAAGTCCCAGAAATCCTCCTCCAACCCCCTCACCAAGCCCATCCTTTACCTTGTTTTCGAGTATCTCGACACCGATCTCAAGAAGTTCATCGATTCCCACCGCAAGGGCCCCAATCCCAGGCCCCTCCCTCCTCCCCTCATCCAGAGCTTCCTCTTCCAGCTCTGCAAGGGCGTGGCTCACTGCCACAGCCACGGTGTCCTCCACCGCGATCTCAAGCCGCAGAACCTTCTCCTTGACCAGCACAAGGGTATTCTTAAGATCGCTGATCTCGGCCTCGGCCGCGCCTTCACCGTCCCTCTCAAGAGCTACACTCACGAGATCGTTACTCTCTGGTACCGTGCCCCCGAGGTTCTCCTTGGCTCTACCCATTACTCCACTGGGGTTGATATCTGGTCTGTTGGCTGCATCTTTGCCGAAATGGTGAGGAGGCAAGCTTTGTTTCCGGGGGATTCTGAGTTCCAGCAGCTCATTCACATATTCAAGATGTTGGGAACTCCAACAGAGGAGAATTGGCCAGGAGTTACTTCTCTGCGTGATTGGCATGTGTACCCACGCTGGGAACCTCAGAGCTTGGCAAAGAATGTGCCTTCCTTAGGACCTGATGGAGTCGACCTTCTTTCGGTCACTCTTGAAGGGTAG 870 0.5563 MEKYEKLEKVGEGTYGKVYKAREKASGSLVALKKTRLEMDEEGVPPTALREVSLLQLLSQSIYIVRLLSVEHVDKVPKSQKSSSNPLTKPILYLVFEYLDTDLKKFIDSHRKGPNPRPLPPPLIQSFLFQLCKGVAHCHSHGVLHRDLKPQNLLLDQHKGILKIADLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTGVDIWSVGCIFAEMVRRQALFPGDSEFQQLIHIFKMLGTPTEENWPGVTSLRDWHVYPRWEPQSLAKNVPSLGPDGVDLLSVTLEG* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0181 289 Pfam Protein kinase domain 4 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0181 289 SMART serkin_6 4 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0181 289 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Gso7g0181 289 PANTHER CELL DIVISION PROTEIN KINASE 1 286 - -
Gso7g0181 289 Gene3D Phosphorylase Kinase; domain 1 1 100 - -
Gso7g0181 289 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Gso7g0181 289 Gene3D Transferase(Phosphotransferase) domain 1 101 288 - -
Gso7g0181 289 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Gso7g0181 289 ProSiteProfiles Protein kinase domain profile. 4 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0181 289 PANTHER CYCLIN-DEPENDENT KINASE B1-2 1 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0181 Gso-Chr7 1659608 1662566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0181 1 288 Core Cell Cycle Gene Families AT3G54180 80.903 8.74e-174 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Gso7g0181 Pkinase 2.9e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0181 K07760 - gmx:100805119 560.066