Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0166 ATGGGAGTCAACATGTCCAACACACCACCTCACACCAAAGACTTGTTTTCCTCTTCATCTCTCTCTCTTAGCTTAGCTGGGATTTTCCGGCATGCTGGGGAGGCGGCGGAGACGTCCGGCATGGAGGTGGCAGGCGGCAATGAGGTCCGGCGAGAGGACACTGTTGAGATTAGCAGCGACAACTCAGGACCCGTGAGATCCAGGTCAGAAGAAGATTTTGATGGTGAAGGTCTTCATGAGGATGACGACGACGGCGATGACAAGAACAGAAAGAAGAAGAAGAGGAAGTATCACAGGCACACCGCTGAACAGATCAGAGAAATGGAAGCGCTTTTCAAGGAATCACCGCATCCTGATGAAAAGCAGAGGCAACAACTCAGCAACCAACTTGGCCTTGCTCCAAGGCAAGTTAAGTTTTGGTTCCAAAATCGTCGAACCCAAATCAAGGCAATACAAGAGCGCCATGAAAATTCATTGTTGAAGACAGAATTAGACAGACTTAGGGAGGAAAATAAGGCCATGAGAGAGACCATAAACAAATCTTGTTGCCCCAATTGTGGCATGGTAACGGCTACCATAGATGCTTCCATGTCCACTGAAGAAAAACAACTTCTTATTGAAAATGCCAAACTCAAAGCCGAGGTAGAGAAGCTCCGAACAGCTTTAGGGAAATTCTCACCAAGAACAACGTCTCCTACTACATCTTCTGCTGGCCATCATGATGAGGAAGAGAATAGAAGCTCTTTGGATTTTTACAATGGAATTTTCGGGCTCGACAAATCAAGGATAATGGATATAGCAAACCGAGCAACGGAGGAGCTCATAAAGATGGCAAATATGGGGGAACCCTTATGGGTTCGTAGCGTTGAAACAGGTCGTGATATACTTAACTACGATGAATATGTGAAGGAGTTCGAAGTTGAAAATTCTGGTAGTGAAAGGCCAAAGACATTCATCGAAGCCTCAAGAGAAACTGAGGTTGTTTTTATGGATCTTCCTCGGCTTCTCCAAAGTTTTCTAGACGTGAATCAATGGAAGGAAATGTTTCCATGCTTAATATCAAAGGCTGCAACTGTTGATGTTATATGCAATGGGGAAGGTTCTAACAGGAATGGTGCAGTGCAATTGATGTTTGCTGAGCTTCAAATGCTCACTCCAATGGTGCCCACCAGAGAAGTGTATTTCGTGAGGTGCGGCAAACAGTTAAGTGATGAACAGTGGGCTATAGTTGATGTCTCCATAGACAAAGTAGAAGACAACATTGACGCATCCCTTGTGAAATGCAGAAAACGCCCATCTGGTTGTATTATTGAGGATAAGTCAAATGGCCATTGCAAGGTGATATGGGTGGAGCACTTGGAGTGCCAAAAGAGCACAATTCATACAATGTATCGAACCATTGTCAATAGTGGTCTAGCTTTTGGGGCAAGGCATTGGATAGAAACACTACAACTTCAATGTGAACGTTTGGTTTTTTACATGGCAACGAATGTTCCAATGAAGGATTCAACTGGTGTTGCGACGTTGGCTGGGAGGAAGAGCATATTGAAGTTGGCACAAAGAATGACATGGAGTTTCTGCCATGCAGTTGGTGCATCAAGTTTCCATACATGGACCAAGGTCACAAGTAAAACAGGAGAAGACATAAGGATTAGCTCTAGGAAGAACTTGAATGAGCCTGGTGAACCTCTTGGGGTTATCTTGTGTGCCGTTTCTTCTGTGTGGCTTCCTGTCTCTCCTAATGTGCTGTTTGATTTCTTGAGGGATGAAGCTCGTCGAAATGAGTGGGATATCATGTCCAGTGGTGGGTCAGTGCAGTCCATTGCAAATTTAGCTAAAGGAAAAGACCGAGGCAATGTTGTAAACATCCAAAAAATAATACAATCAAAAGATAACAGTGTGTGGATATTGCAAGATAGCTGCACAAGTGCTTATGAGTCAATGGTGGTATATGCTCCTGTGGAATTTGCTGGTATACAATCTGTGCTGACAGGATGTGATTCAAGTAATCTTGCTATATTGCCGTCAGGATTTTCAATTCTTCCTGATGGGATTGAGGGAAGGCCATTGGTAATTACGTCAAGGCAAGAAGAAAAATACACTGAAGGAGGCTCTTTGTTTACAATGGCATTCCAGATCCTTGCCAATCCTTCTCCAACAACCAAGTTAACAATGGAGTCTGTGGAATCGGTCAATAATCTTGTGTCTTGTACATTAAGAAATATTAGAACAAGTTTGCAGTGTGAAGATGGTTAG 2256 0.4366 MGVNMSNTPPHTKDLFSSSSLSLSLAGIFRHAGEAAETSGMEVAGGNEVRREDTVEISSDNSGPVRSRSEEDFDGEGLHEDDDDGDDKNRKKKKRKYHRHTAEQIREMEALFKESPHPDEKQRQQLSNQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKTELDRLREENKAMRETINKSCCPNCGMVTATIDASMSTEEKQLLIENAKLKAEVEKLRTALGKFSPRTTSPTTSSAGHHDEEENRSSLDFYNGIFGLDKSRIMDIANRATEELIKMANMGEPLWVRSVETGRDILNYDEYVKEFEVENSGSERPKTFIEASRETEVVFMDLPRLLQSFLDVNQWKEMFPCLISKAATVDVICNGEGSNRNGAVQLMFAELQMLTPMVPTREVYFVRCGKQLSDEQWAIVDVSIDKVEDNIDASLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKSTIHTMYRTIVNSGLAFGARHWIETLQLQCERLVFYMATNVPMKDSTGVATLAGRKSILKLAQRMTWSFCHAVGASSFHTWTKVTSKTGEDIRISSRKNLNEPGEPLGVILCAVSSVWLPVSPNVLFDFLRDEARRNEWDIMSSGGSVQSIANLAKGKDRGNVVNIQKIIQSKDNSVWILQDSCTSAYESMVVYAPVEFAGIQSVLTGCDSSNLAILPSGFSILPDGIEGRPLVITSRQEEKYTEGGSLFTMAFQILANPSPTTKLTMESVESVNNLVSCTLRNIRTSLQCEDG* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0166 751 SMART START_1 265 489 IPR002913 GO:0008289
Gso7g0166 751 ProSiteProfiles START domain profile. 256 492 IPR002913 GO:0008289
Gso7g0166 751 SMART HOX_1 93 155 IPR001356 GO:0003677
Gso7g0166 751 Pfam Homeodomain 94 149 IPR001356 GO:0003677
Gso7g0166 751 SUPERFAMILY Bet v1-like 519 739 - -
Gso7g0166 751 Coils Coil 150 177 - -
Gso7g0166 751 ProSiteProfiles 'Homeobox' domain profile. 91 151 IPR001356 GO:0003677
Gso7g0166 751 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 15 748 IPR042160 -
Gso7g0166 751 Gene3D - 80 163 - -
Gso7g0166 751 SUPERFAMILY Homeodomain-like 81 152 IPR009057 -
Gso7g0166 751 MobiDBLite consensus disorder prediction 222 245 - -
Gso7g0166 751 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 15 748 - -
Gso7g0166 751 CDD homeodomain 98 149 IPR001356 GO:0003677
Gso7g0166 751 ProSitePatterns 'Homeobox' domain signature. 126 149 IPR017970 GO:0000981|GO:0006355
Gso7g0166 751 Gene3D - 314 488 IPR023393 -
Gso7g0166 751 Pfam START domain 266 489 IPR002913 GO:0008289
Gso7g0166 751 Coils Coil 201 221 - -
Gso7g0166 751 MobiDBLite consensus disorder prediction 35 104 - -
Gso7g0166 751 CDD START_ArGLABRA2_like 260 488 - -
Gso7g0166 751 SUPERFAMILY Bet v1-like 258 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0166 Gso-Chr7 1554518 1560306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0166 57 750 Homeobox Transcription Factor Family AT1G79840 64.397 0.0 912
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gso7g0166 START 1.5e-55 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0166 K09338 - gmx:100806193 1431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0166 7 1554518 1560306 Gso8g1704 8 16666302 16672639 GST