Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0162 ATGAGTCGCTCATTGAAAGCTTTCAACAAGCACCTTACTCTCCTCCCTCTTCATCAACGCACCGCTTCTTCTTCTTCTCATGCCTTCATAGCTTCCTCTCCTCTCCCTCTTTTTCCACATCTTGTTTCCTACCCCAGCTTCTCTTTCTCTCTGTTTCGTCCACTCTCTTCATCTGCACCTGCTACATTGATGGAGGTGGTCAAAGCAATTGCCAAGCACGAACCTGCAGCTCCTGAAAGTGTTGCTATCAGAGCTGATCAGAAGAGTTATAGTTACAAGCAACTCATCACATCGGCACAGAAGATATCTAATCTCTTGTGTGGCAGTGATGCACAGACAGGAAATCTCGGTGGAGCTCGAATAGGAATTGTAGCCAAACCTTCTGCTGAATTTGTTGCTGGAATACTTGGGATTTGGCTTAGTGGAGGTGTTGCTGTTCCGCTTGCAACCAGCTATCCAGAAGTAGAGCTCTTGTATGTGATTAATAATTCGGATGTATCTGCAATACTGAGTACTGAGGATCATACTGAAATAATGCAAAGCGTAGCCAATAAAAGCTCTTCTCAGTTTTTTCATCTTCCACCTGTTCTCAACAAGTCTTCTGAGAAAAGCAGAGATAAACATTCACAGAATGGGGGAATTCATACAGATAAAATTTTGTTGGATAAGTTTGGAAGATCAAGTGAAGATCCAGCACTGATTTTGTACACTAGTGGGACAACGGGTAAACCTAAGGGAGTTGTTCATACACACAGAAGCATCATTTCCCAGGTACAAACTTTGACAAAAGCTTGGGAGTACTCATCTGCTGACCAGTTTCTGCATTGTCTACCACTACATCATGTTCATGGGCTTTTCAATGGTTTAATGGCCCCTCTCTATGCAGGTTCCACGGTTGAGTTTTTGCCAAAATTTAGTGTGAGAGGAGTTTGGCAGAGATGGCGTGAGTCATATCCAACCGATGGTTCTAAGGCTGAAGAGGCTATAACTGTGTTCACTGGAGTTCCAACTATCTATGCCCGATTGATACAAGGTTATCATGCAATGGATCCTGAGCTACAAGCTGCTTCAGTATCTGCTGCAAAGAACTTGCGTCTTATGATGTGTGGGTCCTCTGCACTTCCACTGCCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATCGCTTATTGGAACGATATGGCATGACTGAATTTGTTATGGCATTGTCGAATCCATTGAAAGGTGAGCGCAAGCCTGGAACCGTTGGCAAACCATTTCCTGGTATACAGGTCAAGATTATTGCAGATGAAGAGAGTGTGAATGGAAATACTGGAATGGGTGAGCTTTGCATTAAAAGCCCTTCATTGTTTAAAGAATATTGGAAACTTCCTGAGGTAACGAAGGAATCATTTACTGATGATGGATTCTTTAAGACTGGAGATGCAGTTACTACAGATGAAGATGGATATTTCATCATTCTAGGACGTACTAATGCTGATATAATCAAGGCTGGTGGATATAAGCTGTCTGCATTAGAAATTGAATCGGTTATAATAGAGCATCCAGCTGTCTCAGAATGTTGCGTTTTAGGCCTACCAGACAAAGACTATGGAGAGATTGTTGGTGCAATCGTTGTGCCAGAGGCCGATGTTAAACGAAAACAAGATCAAGAATCAAAGCCTGTTCTAAGCCTAGAAGAATTATCCAACTGGGCCAAAGACAAAATTGCACCTTACAAGATTCCAACTCAGCTAATCGTGTGGGATAAACTCCCTCGCAATGCCATGGGGAAGGTAAATAAAAAAGAGCTGAAGAAGCTGCTTGTTTCAGAACAGTGA 1821 0.4283 MSRSLKAFNKHLTLLPLHQRTASSSSHAFIASSPLPLFPHLVSYPSFSFSLFRPLSSSAPATLMEVVKAIAKHEPAAPESVAIRADQKSYSYKQLITSAQKISNLLCGSDAQTGNLGGARIGIVAKPSAEFVAGILGIWLSGGVAVPLATSYPEVELLYVINNSDVSAILSTEDHTEIMQSVANKSSSQFFHLPPVLNKSSEKSRDKHSQNGGIHTDKILLDKFGRSSEDPALILYTSGTTGKPKGVVHTHRSIISQVQTLTKAWEYSSADQFLHCLPLHHVHGLFNGLMAPLYAGSTVEFLPKFSVRGVWQRWRESYPTDGSKAEEAITVFTGVPTIYARLIQGYHAMDPELQAASVSAAKNLRLMMCGSSALPLPVMQEWEAITGHRLLERYGMTEFVMALSNPLKGERKPGTVGKPFPGIQVKIIADEESVNGNTGMGELCIKSPSLFKEYWKLPEVTKESFTDDGFFKTGDAVTTDEDGYFIILGRTNADIIKAGGYKLSALEIESVIIEHPAVSECCVLGLPDKDYGEIVGAIVVPEADVKRKQDQESKPVLSLEELSNWAKDKIAPYKIPTQLIVWDKLPRNAMGKVNKKELKKLLVSEQ* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0162 606 PANTHER MALONATE--COA LIGASE-LIKE 46 603 - -
Gso7g0162 606 Pfam AMP-binding enzyme C-terminal domain 507 592 IPR025110 -
Gso7g0162 606 Pfam AMP-binding enzyme 77 496 IPR000873 -
Gso7g0162 606 PANTHER ACYL-COA SYNTHETASE 46 603 - -
Gso7g0162 606 CDD MCS 79 600 - -
Gso7g0162 606 SUPERFAMILY Acetyl-CoA synthetase-like 57 604 - -
Gso7g0162 606 Gene3D - 67 490 IPR042099 -
Gso7g0162 606 ProSitePatterns Putative AMP-binding domain signature. 234 245 IPR020845 -
Gso7g0162 606 Gene3D - 493 605 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0162 Gso-Chr7 1518933 1526902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0162 229 604 Monolignol Biosynthesis Gene Families AT4G19010 29.668 4.92e-43 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0162 K18660 - gmx:100813324 1172.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0162 7 1518933 1526902 Gso7g0162 7 1518933 1526902 ECH
Gso7g0162 7 1518933 1526902 Gso8g1700 8 16630210 16638759 GST