Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0152 ATGACTACACCCTTGGAACATGATTACATAGGTTTATCAGAGGCTCCATCCATGGAAAAAAGCTGTGACAAGATATCCTCTTCGGTTTCCTCCAACCTTTCTTCTGAGGATGAGAACACTTCATCTCTGAACTTCAAGGAGACAGAGCTGAGGCTTGGCTTGCCCGGTTCTGAGTCTCCTGAGAACAACAAATTAGGGATCTCTCTCTTTGGCAAGGATTTGCAGAATAATGGCTATTCTTCTGCTTCTTCAACCCCTTCCAACAAGAACCTCAAGAGGGGCTTCTCTGATGCCATTAGCTCTTCTTCTTCCTCTTCTCGGAAATGGATTTTCTCCCAGAGTGATGCGGCAGCAACTGAGGCTGATTTGGAAAATGGTTCTAATAATACCTCTGCACGATGCAACAGAGAGGTTGATATGGTTCCTCACTATGAGAAACCAGCTCAGGTTGCTGCAACAAATGACCATGCTACTGTTCCTGCTCCAAAAGCACAAGTTGTGGGATGGCCACCAATTCGATCTTTTCGAAAGAACACGATGGCCTATAATTTGGCAAAATGCAACAACGAAACTGAGGAGAAACCAGGAGTAGCTTGTCTTTATGTTAAGGTCAGCATGGATGGTGCTCCGTATCTCAGAAAGGTTGATCTGAAAACCTACAGCAACTATATTGAACTTTCTTCAGGTCTTGAGAAAATGTTCAGCTGCTTCACCATTGGTCAATGCAATTCTCGTGCACTTCCTGGGAAAGATGGATTAAGTGAGAGTGCATTCAGGGATATTGTTGATGGCTCTGAATATGTTCTTACATATGTAGATAAAGAAGGAGACTGGATGCTTGTGGGTGATGTCCCTTGGGAGATGTTCACTGAGTCATGCAACAAACTAAGGATAATGAAAGGGTCCGAGGCAATCGGGCTAGCTCCAAGGGGTATGGAAAAATGTAGGAGCCAATACTAG 960 0.4427 MTTPLEHDYIGLSEAPSMEKSCDKISSSVSSNLSSEDENTSSLNFKETELRLGLPGSESPENNKLGISLFGKDLQNNGYSSASSTPSNKNLKRGFSDAISSSSSSSRKWIFSQSDAAATEADLENGSNNTSARCNREVDMVPHYEKPAQVAATNDHATVPAPKAQVVGWPPIRSFRKNTMAYNLAKCNNETEEKPGVACLYVKVSMDGAPYLRKVDLKTYSNYIELSSGLEKMFSCFTIGQCNSRALPGKDGLSESAFRDIVDGSEYVLTYVDKEGDWMLVGDVPWEMFTESCNKLRIMKGSEAIGLAPRGMEKCRSQY* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0152 319 Gene3D - 194 312 - -
Gso7g0152 319 SUPERFAMILY CAD & PB1 domains 200 300 - -
Gso7g0152 319 ProSiteProfiles PB1 domain profile. 199 301 IPR000270 GO:0005515
Gso7g0152 319 MobiDBLite consensus disorder prediction 21 46 - -
Gso7g0152 319 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 310 IPR003311 GO:0005634|GO:0006355
Gso7g0152 319 Pfam AUX/IAA family 47 310 IPR033389 -
Gso7g0152 319 PANTHER AUXIN-RESPONSIVE PROTEIN 4 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0152 Gso-Chr7 1449047 1452204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0152 201 317 B3 DNA Binding Superfamily AT1G30330 31.624 2.76e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gso7g0152 AUX_IAA 5.3e-86 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0152 K14484 - gmx:100795203 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0152 7 1449047 1452204 Gso7g0152 7 1449047 1452204 ECH
Gso7g0152 7 1449047 1452204 Gso8g1689 8 16545904 16549033 GST