Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0141 ATGGGTCTGAATCTTTCCTTTGCCAATGGATTTCCGTCTGTCAGTAATGCAGTGCTATGTGCCAAAGCATCGATGCTATTACAGAATGTGCCCCCTGCCATTCTCCTTAGGTTTCTGCGGGAGCATAGATCAGAATGGGCAGACAATAATATGGATGCTTACACAGCTGCTGCTATTAAAGTTGGCCCTTGCAGCTTATCAGGATCTCGTGTTGGAAACTATGGAGGTCAAGTTATACTCCCCCTTGCACACACAATTGAACATGAGGAGTTTTTGGAGGTCATTAAATTGGAAGGAATTGCTCATTCTCCTGAAGACACAATAATGCCCAGAGAAATGTTTCTTTTGCAACTTTGCAGTGGAATGGATGAGAATGCTGTTGGCACTTGTGCTGAACTTATATCTGCTCCAATTGATGCTTCCTTTGCTGATGATGCCCCCCTTTTACCTTCTGGATTTCGCATCATTCCTCTTGAATCTGGAAAGGAAGCTTCCAGCCCCAATCGCACCCTTGACCTTGCATCTGCTCTAGACATTGGTTCCAGTGGAAACCGAGCTTCAAATGAATGTGCTGGAAATTCCAGCTATATGAGATCTGTGATGACAATAGCTTTTGAATTTGCATTTGAAAGCCATATGCAAGAGCATGTAGCATCTATGGCACGTCAATATGTTCGGAGCATTATATCATCGGTCCAAAGGGTAGCATTAGCACTTTCTCCTTCTCATTTGAGTTCACATGCAGGGCTTAGGTCACCATTGGGTACTCCTGAAGCGCAAACCCTTGCTCATTGGATTTGCAACAGTTATAGGTGCTACTTGGGTGTGGAGCTACTTAAATCTAATAACGAGGGGAATGAATCTTTGCTCAAGTCCTTGTGGCATCACTCAGATGCAATATTGTGCTGCACTCTAAAGGCATTGCCAGTGTTCACTTTCTCGAACCAGGCTGGGCTTGACATGCTGGAGACCACCCTTGTTGCATTACAAGATACACCTTTAGAGAAAATATTTGATGATCATGGACGAAAAATACTTTTTTCAGAGTTTCCCCAGATTATTCAACAGGGTTTTGTATGTCTTCAAGGTGGTATTTGTCTTTCAAGCATGGGGCGACCTGTCTCGTACGAAAGAGTTGTTGCTTGGAAGGTGCTGAATGAAGAAGAGAATGCTCATTGTATGTGCTTTATGTTTATGAACTGGTCTTTTGTTTGA 1215 0.4329 MGLNLSFANGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNMDAYTAAAIKVGPCSLSGSRVGNYGGQVILPLAHTIEHEEFLEVIKLEGIAHSPEDTIMPREMFLLQLCSGMDENAVGTCAELISAPIDASFADDAPLLPSGFRIIPLESGKEASSPNRTLDLASALDIGSSGNRASNECAGNSSYMRSVMTIAFEFAFESHMQEHVASMARQYVRSIISSVQRVALALSPSHLSSHAGLRSPLGTPEAQTLAHWICNSYRCYLGVELLKSNNEGNESLLKSLWHHSDAILCCTLKALPVFTFSNQAGLDMLETTLVALQDTPLEKIFDDHGRKILFSEFPQIIQQGFVCLQGGICLSSMGRPVSYERVVAWKVLNEEENAHCMCFMFMNWSFV* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0141 404 Pfam MEKHLA domain 261 403 IPR013978 -
Gso7g0141 404 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 404 IPR044830 GO:0003700
Gso7g0141 404 PANTHER CLASS III HD-ZIP PROTEIN CNA1 1 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0141 Gso-Chr7 1350129 1354528 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0141 1 356 Homeobox Transcription Factor Family AT1G52150 82.865 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0141 K09338 - gsj:114417991 805.823