Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0137 ATGCCGGTACTGCGTAGCGGAGCGCGCAAGGGCCGGGCAGCAGCGAAACAGCAACAACAAGAACAACAACAACAGCAACAAAAGCAGCAGCAGCAGCAGCATAGTCCCGTGGTGGAGGGAGAGGCTATTGCGACGAGGACTCGTCGGCGGCGTGCGGCGGCGGCAGCAGCAGCGGCAGTGCCGGAGAGTAACAATAACAACAACAATAATAATACCAATAACCAGCAGCAACAGCCGGAGCAGGTGGCAGTGGTAAATGAGAACGTAGCTATTGCGGTGAGGGAAGAAGAGAATAATCGGGTAGCGGAGGAAGGTGTTGTTGGCGGTGGTGGAGCAGAGAGGGAAGGGGTTGCGGAGAAAGAGATGGGTGGCTGTGACAGTGGGGGACCGAGCAATGATAAGGCCAATGCCGCTGGGGAAGATGACGCCAATGCTCCTCAGGTTCCTGAGAAGATCCAAGTGGGTAATTCCCCTTGGTATAAAGTAGAAAGAAAACTTGGCAAGGGTGGATTTGGTCAAGTATATGTAGGGCGACGTACTGGTGGAAATTTGAATGAGAGAACTGGATCTGGAGCTGTAGAGGTTGCATTAAAACTTGAGCATAGAACTAGTAAAGGATGTACCTATGGACCACCCTACGAGTGGCAAGTGTACAACACTCTCGGTGGCAGTCACGGTGTACCTCAAGTACACTACAAGGGCAGGCAGGGTGACTATTATGTCATGGTTATGGATATGCTGGGACCTAGCCTCTGGGACGTTTGGAATAATAGCAATCATCACATGACCACTGAAATGGTTGCTTGTATTGCCATTGAAGCAATATCTATATTGGAAAAAATGCACTCTCGAGGGTATGTGCATGGGGATGTGAAGCCTGAAAATTTTCTGCTTGGTGCTCCTGGGACACCTGATGAGAAAAAATTGTTCCTTGTAGATCTGGGATTAGCTACTAAGTGGAGGGATAGTACAACGGGCTCGCATGTGGAATATGACCAAAGGCCAGATGTTTTCAGGGGTACAGTCCGCTATGCTAGTGTGCATGCACATTTAGGGAGAACTGCAAGCAGGAGGGATGACTTGGAATCTCTTGCATATACACTGATTTTTCTTCTTCGAGGTCGCCTTCCTTGGCAGGGTTTCCAGGGGGAAAACAAAGGATTTCTGGTTTGTAAGAAGAAAATGGGAACATCTCCAGAGACCCTATGCTGCTTTAGTCCCCTACCTTTTAAGCAGTTTGTTGAACATGTTGTAAACTTAAAGTTTGATGAAGAGCCTAACTATGCAAAATACATTTCTCTATTTGATGGGATTGTTGGCCCTAACCCAGATATTAGACCAATTAATACAGAAGGGGCACAAAAGCTCATTGGTCACAAGAGAGGCCGGTTGGCGATGGAAGAAGAGGACGATGACCAACCCAAAAAGAAGATTCGTATAGGTTTGCCAGCATCCCAGTGGATAAGTGTTTACAATGCTCGGAGACCAATGAAACAAAGATATCACTACAACGTATCAGATACAAGGCTATCCCAGCACATCGAGAAAGGAAATGAGGATGGCTTATATATTAGCGGTGTTGCTTCATGTCAGAACCTATGGGCGTTAATCATGGATGCAGGGACAGGTTTCACTGCCCAAGTTTACGAGCTCTCACCCTTCTTTCTCCATAAGGAATGGATCATGGAGCACTGGGAAAAAAATTACTATATCAGTGCAATTGCTGGAGCTGTAAACGGGAGCTCGCTAGTAGTAATGTCTAAGGGCACACAGTATTTGCAGCAATCATATAAAGTTAGTGACTCATTTCCTTTCAAGTGGATTAACAAAAAGTGGAGGGAGGGCTTTTACGTGACTTCAATGGCCACCTCAGGGTCCAGATGGGGAGTCGTCATGTCTCGTGGTGCAGGATTCTCAGACCAGGTGGTTGAACTAGATTTTCTGTATCCTAGTGAGGGGATTCACAAGCGTTGGGACTGTGGGTATCGAATCACAGCTACTGCTGCAACTTGGGACCAAGCTGCTTTTGTCCTGAGTGTGCCAAGAAGGAAGCCTTTGGATGAAACCCAGGAAACGCTTAGGACTTCTGCTTTTCCTAGCACACATGTCAAGGAGAAGTGGGCAAAGAACCTCTACATTGCTTCCATTTGCTACGGACGTACAGTTTCTTAA 2172 0.4733 MPVLRSGARKGRAAAKQQQQEQQQQQQKQQQQQHSPVVEGEAIATRTRRRRAAAAAAAAVPESNNNNNNNNTNNQQQQPEQVAVVNENVAIAVREEENNRVAEEGVVGGGGAEREGVAEKEMGGCDSGGPSNDKANAAGEDDANAPQVPEKIQVGNSPWYKVERKLGKGGFGQVYVGRRTGGNLNERTGSGAVEVALKLEHRTSKGCTYGPPYEWQVYNTLGGSHGVPQVHYKGRQGDYYVMVMDMLGPSLWDVWNNSNHHMTTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGAPGTPDEKKLFLVDLGLATKWRDSTTGSHVEYDQRPDVFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLLRGRLPWQGFQGENKGFLVCKKKMGTSPETLCCFSPLPFKQFVEHVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLIGHKRGRLAMEEEDDDQPKKKIRIGLPASQWISVYNARRPMKQRYHYNVSDTRLSQHIEKGNEDGLYISGVASCQNLWALIMDAGTGFTAQVYELSPFFLHKEWIMEHWEKNYYISAIAGAVNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTSMATSGSRWGVVMSRGAGFSDQVVELDFLYPSEGIHKRWDCGYRITATAATWDQAAFVLSVPRRKPLDETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVS* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0137 723 Coils Coil 12 34 - -
Gso7g0137 723 ProSiteProfiles Protein kinase domain profile. 160 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0137 723 Gene3D Transferase(Phosphotransferase) domain 1 125 478 - -
Gso7g0137 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 286 298 IPR008271 GO:0004672|GO:0006468
Gso7g0137 723 MobiDBLite consensus disorder prediction 106 151 - -
Gso7g0137 723 SMART serkin_6 160 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0137 723 PANTHER CASEIN KINASE-RELATED 119 696 - -
Gso7g0137 723 PANTHER CASEIN KINASE 1-LIKE PROTEIN HD16 ISOFORM X1 119 696 - -
Gso7g0137 723 Pfam Protein kinase domain 160 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0137 723 MobiDBLite consensus disorder prediction 60 80 - -
Gso7g0137 723 MobiDBLite consensus disorder prediction 1 80 - -
Gso7g0137 723 SUPERFAMILY Protein kinase-like (PK-like) 160 439 IPR011009 -
Gso7g0137 723 ProSitePatterns Protein kinases ATP-binding region signature. 166 198 IPR017441 GO:0005524
Gso7g0137 723 MobiDBLite consensus disorder prediction 13 38 - -
Gso7g0137 723 CDD STKc_CK1 160 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0137 Gso-Chr7 1297436 1303296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0137 114 384 AGC Kinase Gene Family AT3G08720 21.898 1.02e-08 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Gso7g0137 Pkinase 2.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0137 - - gmx:100800869 1313.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0137 7 1297436 1303296 Gso7g0137 7 1297436 1303296 ECH
Gso7g0137 7 1297436 1303296 Gso8g1675 8 16410204 16416132 GST