Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0127 ATGGGGAAAGCTAGCAGGTGGTTGAAAGGGTTGTTGGGGATGAAGAAGGAGAAGGACCATAGTGACAATTCAGGCTCATTGGCTCCTGACAAGAAGGAGAAGAAAAGGTGGAGTTTTGCCAAGCCAGGGAAGGATGTGCCACCTTCAGTTCCTGCCACTGATAACACCTGGCTCAGATCCTATATTTCTGAGACAGAGAATGAGCAGAACAAGCATGCAATTGCGGTGGCAGCCGCCACCGCGGCTGCTGCTGATGCCGCCGTGGCCGCTGCGCAGGCGGCTGTGGCAGTTGTGAGGCTCACAAGCCAGGGGAGAGGGGCATTGTTCAGTGGAAGCAGGGAGAAGTGGGCTGCTGTGAAGATCCAAACTTTTTTTAGAGGCTACTTGGCACGGAAGGCTCTTAGAGCACTGAAAGGATTGGTTAAGATACAAGCTCTTGTTAGAGGGTATTTGGTTAGAAAGAGGGCTGCTGCAACTCTTCACAGTATGCAAGCTCTAATAAGAGCTCAAACTGCTGTTAGAACACAGCGAGCTCGTCGCTCGATGAGCAAAGAAAACAGATTTCTACCTGAAGTTCTTGCAAGAAAATCTGTGGAACGATTTGATGAAACAAGGAGTGAATTCCACAGTAAAAGGCTACCTACATCCTATGAAACATCCTTGAATGGTTTTGATGAGAGCCCCAAGATTGTTGAAATTGACACATACAAGACTCGATCAAGGTCTAGGCGCTTTACCTCTACAATGTCTGAGTGTGGAGAAGACATGTCCTGTCATGCAATCTCATCCCCTCTTCCTTGTCCAGTCCCGGGTCGAATCTCAGTTCCTGATTGCAGATACATTCAAGATTTTGATTGGTACTACAATGTTGATGAGTGTAGATTCTCCACAGCTCATAGCACCCCACGTTTCACAAACTATGTGAGGCCTAATGTTCCAGCTACACCAGCCAAGAGTGTTTGTGGAGACACCTTCTTCAGACCTTACTCCAATTTCCCCAACTACATGGCCAATACTCAGTCATTCAATGCAAAACTAAGGTCTCATAGTGCTCCAAAGCAAAGACCTGAACCCAAGAAAAGGCTCTCACTCAATGAAATGATGGCAGCAAGAAACAGCATAAGTGGTGTTAGAATGCAAAGGCCATCATCCAATTTCTTCCAGACTCAAGAAGACTCATGGAATTTTTGA 1191 0.4677 MGKASRWLKGLLGMKKEKDHSDNSGSLAPDKKEKKRWSFAKPGKDVPPSVPATDNTWLRSYISETENEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGALFSGSREKWAAVKIQTFFRGYLARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALIRAQTAVRTQRARRSMSKENRFLPEVLARKSVERFDETRSEFHSKRLPTSYETSLNGFDESPKIVEIDTYKTRSRSRRFTSTMSECGEDMSCHAISSPLPCPVPGRISVPDCRYIQDFDWYYNVDECRFSTAHSTPRFTNYVRPNVPATPAKSVCGDTFFRPYSNFPNYMANTQSFNAKLRSHSAPKQRPEPKKRLSLNEMMAARNSISGVRMQRPSSNFFQTQEDSWNF* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0127 396 MobiDBLite consensus disorder prediction 10 41 - -
Gso7g0127 396 PANTHER IQ-DOMAIN 5-RELATED 1 386 - -
Gso7g0127 396 ProSiteProfiles IQ motif profile. 138 165 IPR000048 GO:0005515
Gso7g0127 396 MobiDBLite consensus disorder prediction 1 52 - -
Gso7g0127 396 Pfam Protein of unknown function (DUF4005) 312 375 IPR025064 -
Gso7g0127 396 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Gso7g0127 396 PANTHER - 1 386 - -
Gso7g0127 396 SMART iq_5 113 135 IPR000048 GO:0005515
Gso7g0127 396 SMART iq_5 136 157 IPR000048 GO:0005515
Gso7g0127 396 Gene3D - 67 140 - -
Gso7g0127 396 Pfam IQ calmodulin-binding motif 141 155 IPR000048 GO:0005515
Gso7g0127 396 Pfam IQ calmodulin-binding motif 116 135 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0127 Gso-Chr7 1177829 1180855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0127 1 379 IQD Protein Family AT3G16490 55.980 1.14e-114 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0127 - - gmx:100797686 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0127 7 1177829 1180855 Gso7g0127 7 1177829 1180855 ECH
Gso7g0127 7 1177829 1180855 Gso8g1663 8 16281073 16283445 GST
Gso15g0187 15 1611563 1613664 Gso7g0127 7 1177829 1180855 PCT
Gso11g3626 11 51918012 51921036 Gso7g0127 7 1177829 1180855 PCT
Gso7g0127 7 1177829 1180855 Gso15g0187 15 1611563 1613664 PCT
Gso7g0127 7 1177829 1180855 Gso11g3626 11 51918012 51921036 PCT