Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0118 ATGATACATCAAACAATGATGGGAATGTTATTGCAGTTTCTTTATGCATTGTTTGGGGTACTTACTGCTGTTGTTCTTGTTCAAGCACAGGATCAATCAGGATTCACTAGCATTGATTGTGGTCTACCTGAAGCTTCAAGCTATAATGAGAAGACCACAGGCATATTTTACATTTCAGATGCCAAATTTATAGATGCTGGTGTAAGCAAGAGTATTTCACCTGCACAGAAGAGTACTCATCTACAACAGCTAGCATATGTGAGGAGTTTTCCTAGTGGGGAGAGAAACTGTTACAGAATAAATGTAACAAGTGGTACTAAGTATTTGATCAGAGCTACTTTCTTTTATGGAAACTATGATGGTCTCAATCAGCCCCCACAATTTGATCTTCATCTTGGAGCTAATATATGGGACACAGTGAACTTCCCCAATGCTTCACTCAGTGAAATCAGTGAGATCATTCACACTCCATCACTAGATTACATACAACCATGTCTGGTTAACACAGGCAAAGGGACTCCATTCATTTCAGCTATAGAATTGAGGACTTTGAACAATGCTTTCTATGTCACTGCCTCAGCTGAATCATTGGCATACTATCAGCGATATGATTTAGGTTCCATCACCAACTTAGGATACAGGTACAACTATGATGTTTATGACCGCATCTGGGTGCCTCACGGATTGAACCAGTGGACACAATTAAGCAGCACACTCCATCTTCTTGATATATTCCAGAATGATTATAAACTACCAGAAGTTGTCATGAGCACTGCTGCTACACCAATAAATGCTAGTGCTCCTTTTCAGTTCTATTGGGGTCCAGATAATGTGGATGATAAATTCTACATCTACATGCACTTTAGTGAGGTTGAAATTCTGGCAGAAAATGAAACTAGAACATTCAATATCTTCATGAATGGAAAGTTATTCTATGGACCTCTAACTCCTGGATATCTGACGACAAATACCATATATGCAAAATCAGCTTTGACTGGAGCTACAAGGTACCTATTTTCTCTTGCTAAGACAGGGACTTCTACTCTTCCACCCATCATTAATGCCATGGAGATTTATAAAGTGATAGATTTTCCACAATCAGAAACTGAACAAGATGATGTTGATGCTATCACAAACATTAAAAACGCTTATGGGGTGAATAGAAATTGGCAAGGAGATCCATGTGGCCCAGTAGCATACATTTGGGAAGGTCTAAATTGTAGTTATGATAACACCCCAAGAATCACATCCTTGAATTTATCTTCAAGTGGACTGACCGGGCAGATATCATCTTTCATCTCCGAGCTCACTATGTTACAGTACTTGGATTTATCCAACAATAGTTTAAGCGGGTCATTACCTGATTTTCTGACACAACTGCAATCACTTAAAGTCTTAAACTTGGTAAATAACAACCTTACTGGTCCAGTTCCTGGAGGACTTGTTGAAAGATCAAAGGAAGGTTCACTATCATTGAGCCTGGGGCAAAATCCAAATCTATGTGAATCTGATCCATGCATCCAGCAGTCAAATAACAAGCAGCCAGATGCTGCTAATCAGAATAAGAACAAAAATAATATAGTTATTCCGGCAGCAACATCCGTTGCTGGAATTTTGGTGCTCGTAATAATTGTAGTAACAGCTATAATCTGCGGCCTTAAAAGGAGAAAACCACAAGCATCTGTGAACATTGATGTTCAGACCAATACTCCAAGTGGATCACAATTTGCATCGAAGCAACGGCAATATTCATTCAATGAGCTTGTTAAGATCACCGATGACTTTACCAGAATTCTTGGTAGAGGTGCATTTGGAAAAGTTTATCACGGAATTATTGACGACACTCAAGTAGCTGTAAAGATGCTTTCTCCATCAGCAGTACGAGGATATGAACAATTTCTAGCAGAGGTTAAACTTCTGATGAGAGTTCATCACAGAAATCTGACTTCTCTTGTTGGGTATTGCAATGAAGAAAACAATATGGGGCTCATCTATGAATATATGGCAAATGGAAACTTGGATGAAATTCTTTCAGGAAAAAGTAGCAGGGCAAAGTTCTTGACATGGGAAGACAGACTCCAAATAGCACTGGATGCAGCCCAAGGACTGGAATATCTGCATAACGGTTGTAAGCCACCAATAATCCACAGAGATGTGAAATGTGCAAATATTTTATTAAATGAAAACTTCCAAGCAAAATTGGCTGATTTTGGGCTATCCAAAAGCTTTCCCACAGATGGGGGCTCTTATATGTCCACTGTTGTTGCTGGAACTCCCGGTTATTTGGATCCTGAGTACAGCATATCAAGCAGGTTGACAGAGAAAAGTGATGTTTACAGCTTCGGAGTTGTTCTTTTGGAGATGGTCACAGGTAAACCAGCTATTGCAAAAACACCTGAGAAGACTCACATAAGTCAGTGGGTTAAATTCATGCTTCCTAATGGGGATATAAAGAATATTGCTGACTCAAGGTTACAAGAAGATTTTGACACAAGCTCAGTCTGGAGAGTTGTTGAAATAGGAATGGCTTCTGTGTCCATTAGTCCTGTCAAAAGACCAAGTATGAGCAATATAGTGAACGAACTAAAGGAGTGTCTGACTACAGAATTAGCTCGAAAATATAGTGGTCGTGACACTGAAAACAATGACTCCATTGAGTTGGTCACTCTGAATTTCACAACTGAACTTGGTCCCCCAGCTAGGTAG 2706 0.395 MIHQTMMGMLLQFLYALFGVLTAVVLVQAQDQSGFTSIDCGLPEASSYNEKTTGIFYISDAKFIDAGVSKSISPAQKSTHLQQLAYVRSFPSGERNCYRINVTSGTKYLIRATFFYGNYDGLNQPPQFDLHLGANIWDTVNFPNASLSEISEIIHTPSLDYIQPCLVNTGKGTPFISAIELRTLNNAFYVTASAESLAYYQRYDLGSITNLGYRYNYDVYDRIWVPHGLNQWTQLSSTLHLLDIFQNDYKLPEVVMSTAATPINASAPFQFYWGPDNVDDKFYIYMHFSEVEILAENETRTFNIFMNGKLFYGPLTPGYLTTNTIYAKSALTGATRYLFSLAKTGTSTLPPIINAMEIYKVIDFPQSETEQDDVDAITNIKNAYGVNRNWQGDPCGPVAYIWEGLNCSYDNTPRITSLNLSSSGLTGQISSFISELTMLQYLDLSNNSLSGSLPDFLTQLQSLKVLNLVNNNLTGPVPGGLVERSKEGSLSLSLGQNPNLCESDPCIQQSNNKQPDAANQNKNKNNIVIPAATSVAGILVLVIIVVTAIICGLKRRKPQASVNIDVQTNTPSGSQFASKQRQYSFNELVKITDDFTRILGRGAFGKVYHGIIDDTQVAVKMLSPSAVRGYEQFLAEVKLLMRVHHRNLTSLVGYCNEENNMGLIYEYMANGNLDEILSGKSSRAKFLTWEDRLQIALDAAQGLEYLHNGCKPPIIHRDVKCANILLNENFQAKLADFGLSKSFPTDGGSYMSTVVAGTPGYLDPEYSISSRLTEKSDVYSFGVVLLEMVTGKPAIAKTPEKTHISQWVKFMLPNGDIKNIADSRLQEDFDTSSVWRVVEIGMASVSISPVKRPSMSNIVNELKECLTTELARKYSGRDTENNDSIELVTLNFTTELGPPAR* 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0118 901 ProSitePatterns Serine/Threonine protein kinases active-site signature. 714 726 IPR008271 GO:0004672|GO:0006468
Gso7g0118 901 Gene3D Phosphorylase Kinase; domain 1 580 667 - -
Gso7g0118 901 ProSiteProfiles Leucine-rich repeat profile. 438 460 IPR001611 GO:0005515
Gso7g0118 901 SUPERFAMILY Protein kinase-like (PK-like) 573 862 IPR011009 -
Gso7g0118 901 Gene3D Transferase(Phosphotransferase) domain 1 668 887 - -
Gso7g0118 901 PRINTS Leucine-rich repeat signature 439 452 - -
Gso7g0118 901 PRINTS Leucine-rich repeat signature 460 473 - -
Gso7g0118 901 PANTHER OS07G0107800 PROTEIN-RELATED 21 901 - -
Gso7g0118 901 SUPERFAMILY L domain-like 379 484 - -
Gso7g0118 901 Pfam Protein tyrosine and serine/threonine kinase 595 862 IPR001245 GO:0004672|GO:0006468
Gso7g0118 901 ProSitePatterns Protein kinases ATP-binding region signature. 599 620 IPR017441 GO:0005524
Gso7g0118 901 Gene3D Ribonuclease Inhibitor 374 494 IPR032675 -
Gso7g0118 901 ProSiteProfiles Protein kinase domain profile. 593 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0118 901 Pfam Malectin-like domain 38 361 IPR024788 -
Gso7g0118 901 CDD STKc_IRAK 599 864 - -
Gso7g0118 901 Pfam Leucine rich repeat 413 473 IPR001611 GO:0005515
Gso7g0118 901 SMART serkin_6 593 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0118 901 PANTHER PUTATIVE-RELATED 21 901 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0118 Gso-Chr7 1069039 1074215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0118 13 901 Receptor kinase-like Gene Family AT1G51800 49.504 0.0 872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gso7g0118 Malectin_like 1.5e-113 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0118 - - gmx:100779474 1610.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0118 7 1069039 1074215 Gso8g1642 8 16046974 16056409 GST
Gso11g3617 11 51845729 51850502 Gso7g0118 7 1069039 1074215 PCT