Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0112 ATGGCCACCGTTCCAGGGCAGCTCGTGTGGGAGATCGTGAAGAAAAACAACTCCTTTTTGGTCAAGCAGTTCGGAAGGGGGACCCAGAGCGTCGAATTCAGCAGAGAGAGCAACAATCTCTACAACCTCAATTCGTTCAAGTACTCTGGTTTGGCAAACAAGAAAACTGTTACGGTACAGCCTGAGGGTAAAGATCAGGCTGTGTTGTTGGCTACAACAAAGACAAAGAAGCAAAACAAGCCTGCTGCATTGCTTCACAAATCTGTGATGAAGAAGGAGTTCAGGAGGATGGCAAAGGCTGTTGAAAATCAGGTGGCAGAAAATTACTACAGGCCCGATCTCAAGAAGGCCGCCCTTGCAAGGTTGAGTGCTGTTCACAGAAGCCTCAAAGTTGCCAAGTCTGGTGTCAAGAAGAGGAATAGACAGGCAGTGAAGGTCGCCAGTAGGAAGTGA 453 0.4834 MATVPGQLVWEIVKKNNSFLVKQFGRGTQSVEFSRESNNLYNLNSFKYSGLANKKTVTVQPEGKDQAVLLATTKTKKQNKPAALLHKSVMKKEFRRMAKAVENQVAENYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQAVKVASRK* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0112 150 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 1 150 - -
Gso7g0112 150 PANTHER 60S RIBOSOMAL PROTEIN L28 1 150 IPR002672 GO:0003735|GO:0005840|GO:0006412
Gso7g0112 150 Gene3D - 6 134 - -
Gso7g0112 150 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0112 Gso-Chr7 1007267 1009203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0112 1 143 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 72.727 1.56e-76 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0112 K02903 - gmx:100499921 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0112 7 1007267 1009203 Gso7g0112 7 1007267 1009203 ECH
Gso7g0112 7 1007267 1009203 Gso8g1629 8 15943098 15945198 GST
Gso15g0201 15 1781706 1783997 Gso7g0112 7 1007267 1009203 PCT
Gso11g3611 11 51799121 51802640 Gso7g0112 7 1007267 1009203 PCT
Gso7g0112 7 1007267 1009203 Gso15g0201 15 1781706 1783997 PCT
Gso7g0112 7 1007267 1009203 Gso11g3611 11 51799121 51802640 PCT