Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0099 ATGGCTTATTTTGGGAAAACAATAGATGATTTCTCATGGACTTGTCTGAAGGATTTTGAATTCACTTCTTTCTGTTCGCAAAGAACCACAATAGACACCATAAATCTACTTTTTGTGTGTTTCTTCTACACGTCTATGATTATCAGTATAATCAGAAGATGTTCTATAAGTTGTAGTTTCAGGACAAAATGGACTTTCCTTGTTGCCTCTATCTGCTGCGCTATTATTAGCATTGCTTTTTACAGTATTGGCTTGTGGATTCTCATAGTCAAAACTGATAACACCAAGCAACTGAGCTGGGTAGCTTGCGTTGTCAGAGGATTTGTTTGGACTTCTTTGGCAGTTTCTCTGCTTGTTCAGAGAGAAAAATGGATCAAAATTCTGAACTGTGCCTGGTGGACATGTTCCTGTGTACTGGTTTCATCTCTCATCATAGAGATTCTGTTGAGAAAGCATGCAATAGAAATTTTTGATATAGTACAATGGCTTACACACTTCCTTCTTCTGTTTTGTGCCTTCCAAAATCTATGTTACTATGTCTCTCAAAGTCTGCCAGAAAGCTTATCTGAACCACTGTTAGCTCAAGAAGTTGACACTAAACAAACAGAACTAGGCCATAGTACCTTCCTCAGCAAATTGACTTTCTCTTGGGTTAACTCCTTACTCCGTCTGGGTTACTCAAAGCCACTAGCTCTTGAAGACATCCCTTCCCTTCTTTCTGAAGATGAAGCAGAATTTGCGTACCAAAACTTTATGCATACATGGGAATCCCTTGTAAGGGAGAGTAGCAAGGACAATACCAAAAACTTGGTTCTCTGGTCTGTTGTTAGAACTCACTTAAAAGAGAACATACTCATAGCTTTTTATGCACTACTTAGAACCATAGCTGTGACTGTTTCGCCTTTAATACTTTATGCTTTTGTCAACTACTCAAATAGCAGGGATGCCAAGCAAACAAATCTCAAAGAAGGTCTTTCCATAGTTGGTTTTCTTATTCTCTCCAGAGTGGTTGATTCTGTGTCCCAGAGACATTGGTTTTTTGATTCCAGGAGATCAGGATTGAAGATAAGATCAGCTCTGATGGTGGCAGTGTATAAAAAACAGCTAAAGCTTTCTAGCTCGGCAAGGAGAAGGCACTCAACAGGTGAAATTGTGAATTACATTGCTGTTGACACATATCGTATGGGAGAATTTCCATGGTGGTTTCATATATCATGGACTTCTGCAGTACAACTTGTTCTCTCTGTTGGTGTCCTTTTTGGTGTTGTTGGTGTTGGTGCTCTTCCTGGTTTAGTCCCACTTGTTATATGTGGACTTATCAATGTACCATTTGCTAAGATCCTACAACATTGTATGGCACAGTTCATGATTTCACAGGATGAGCGTCTTAGATCAACTTCAGAAATTCTGAATAGCATGAAAATCATTAAGTTACAATCCTGGGAGGACAAATTCAAGAATTTGGTTGAGAACCTACGTGCTAAAGAGTTCATCTGGCTGTCTAAGTCGCAGATGATGAAATCTTATGGAACATTTCTGTATTGGATGTCACCTACCATCGTTTCTGCTGTTGTTTTCCTCGGTTGTGCTCTTTTCAATAGTGCCCCGTTGAATGCTGGAACCATTTTCACAGTTTTTGCAACGTTGAGGAACTTGTCAGAACCTGTTCGAATGATTCCAGAGGCTCTATCCATGATGATCCAAGTTAAGGTATCCTTTGATCGTCTCAATACCGTTTTGCTTGATGAAGAGCTAGATAGTAGCAATGCTAACAGAAGAAATATAAACCAAAGTTCGGTTAATGCTGTGGAAATCCAAGCCGGAAATTTCATTTGGGATCACGAATCAGTATTTCCAACTTTAAGAGATGTGAATTTACAAATTGAACAAGGACAGAAAATCGCAGTTTGTGGGCCTGTTGGCGCTGGAAAATCATCTCTTTTATTTGCAGTACTTGGAGAGTTTCCAAAGATCTCAGGAACCGTTAATGTGTCTGGCACTGTAGCCTATGTTTCTCAAACTTCTTGGATACAAAGTGGGACAGTTCGAGATAATATACTCTTTGGAAAGCCAATGGACAAAACAAGATATGATGATGCCATTAAAGTTTGTGCTTTAGACAAGGATATTAATGATTTTAGCCATGGTGATCTGACTGAAATAGGTCAGCGAGGGATTAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTAGCTCGTGCAGTCTACAATGACGCTGACATCTATCTCCTTGATGACCCTTTCAGTGCAGTTGATGCTCACACTGCTGCTATCCTCTTCAATGACTGTGTAATGATGGCTCTAAGAGAGAAAACAGTCATTCTAGTCACTCATCAAGTGGAGTTTCTCTCACAAGTGGATACAATCCTGGTAATGGAAGGTGGAAAAGTTACTCAAGCAGGTAATTATGTGAATCTCTTGACATCTGGGACAGCCTTTGAACAACTTGTGAGCGCTCATAAGGAAGCAATTTCAGAGTTGGAACAAAATAATGAAAACAAAACTCATACAGAAGAGTCTCAAGGTTTTTATCTCACTAAAAACCAAAGTGAGGGGGAGATTTGTTACAAGGGTCAACTTGGGGTACAGCTTACACAAGAAGAAGAAAAAGAGATTGGTGATGTTGGCTGGAAGACAATCTGGGATTATATTTCATTTTCCAGGTGTTCAATGATGCTGTGTTGGATCATATTGGGACAATTTGCTTTTGTTGTTTTACAGGCTGCGTCAACGTTTTGGCTTGTTCAAGCCATTGAAATTCCAAAATTAAGTAGTGTCACCTTGATTGGAGTTTACTCATTAATTTCATTTGGTGGTACTGCATTTGCATTTCTAAGGACTAGCATTGGTGCACACCTCGGATTAAAAGCTTCTACAGCCTTCTTCTCAAGTTTCACTACTTCTATCTTCAATGCTCCTATGCTGTTCTTTGATTCAACCCCTGTAGGAAGGATTTTAACCCGCGCATCATCAGATTTAACTATTTTGGACTTTGATATACCCTTTTCCATCACTTTTGTAGCTTCTGTTCCAATTGAAATTTTGATGATAATTGGTATAATGGTTTACGTAACATGGCAAGTTCTCATTGTTGCTGTTCCAGCAATGGTTGCATCAAAATATGTTCAGGGATATTATCAAGCCTCAGCAAGGGAATTGATAAGGATTAATGGAACCACAAAAGCTCCTGTCATGAATTTTGCAGCTGAGACATCACTTGGATTGGTTACTGTAAGAGCATTTAATATGGCAGACAGATTTTTTAAAAATTACTTAAAACTTGTGGACACAGACGCAGCACTGTTCTTTTATTCTAATGCGGCCATGGAATGGTTAGTTTTAAGGATTGAAACTCTTCAAAATTTGACAGTCATCACTGCAGCTTTGCTGCTTGTTCTAGTTCCTCAGGGATACGTGTCCCCAGGCCTTGTGGGGCTGTCTCTCTCTTATACATTCACCTTGACAGGAACCCAAATATTTTTGACTCGATGGTATTGCAACTTATTAAACTATATTATCTCTGTTGAGAGAATCAAGCAATTCATTCAGCTTCCAGAAGAGCCTCCTGCCATTGTGGAGGACAACCGGCCTCCATCTTCATGGCCTTCCAAAGGCAGGATTGACCTTCAAGCCTTAGAGATAAGATATCGTCCTAATGCTCCATTAGTGCTTAAGGGTATCACTTGTACGTTTAAGGAAGGAAGTAGAGTGGGAGTTGTAGGAAGGACTGGAAGTGGAAAAAGTACGCTCATAAGTGCTCTTTTTCGCTTAGTTGAGCCAGCAAGTGGTGATATTCTTATAGATGGGATTAACATATGCTCAATAGGGTTGAAGGATTTGAAAATAAAGCTAAGCATCATCCCTCAAGAACCAACTCTTTTCAAGGGAAGCATTAGAACCAACTTGGACCCTCTAGGCCTGTACTCAGATGATGATTTATGGAAGGCATTAGAAAAATGTCAGCTTAAGGAAACTATCAGCCGTCTACCAAATCTCTTGGACTCTTTGGTGAGTGATGAAGGTGGAAATTGGAGCTTGGGACAGCGCCAACTATTTTGTCTTGGAAGAGTACTACTTAAGAGGAACAGAATTCTAGTTCTGGATGAAGCTACCGCATCCATTGACTCTGCCACAGATGCCATTCTACAACAAATAATTAGACAAGAATTTGCCAAATGCACAGTTATAACAGTGGCTCACAGGGTTCCAACTGTAATAGATAGTGACATGGTCATGGTCCTCTCCTATGGGAAACTTGTGGAATATGATGAGCCTTCAAAGCTAATGGACACCAACTCCTCGTTCTCTAAGCTGGTAGCTGAATATTGGTCCAGCTGCAGAAAGAATTCTCCACAAACGTTAGCAGGCAGCAACATTGAATAA 4404 0.3992 MAYFGKTIDDFSWTCLKDFEFTSFCSQRTTIDTINLLFVCFFYTSMIISIIRRCSISCSFRTKWTFLVASICCAIISIAFYSIGLWILIVKTDNTKQLSWVACVVRGFVWTSLAVSLLVQREKWIKILNCAWWTCSCVLVSSLIIEILLRKHAIEIFDIVQWLTHFLLLFCAFQNLCYYVSQSLPESLSEPLLAQEVDTKQTELGHSTFLSKLTFSWVNSLLRLGYSKPLALEDIPSLLSEDEAEFAYQNFMHTWESLVRESSKDNTKNLVLWSVVRTHLKENILIAFYALLRTIAVTVSPLILYAFVNYSNSRDAKQTNLKEGLSIVGFLILSRVVDSVSQRHWFFDSRRSGLKIRSALMVAVYKKQLKLSSSARRRHSTGEIVNYIAVDTYRMGEFPWWFHISWTSAVQLVLSVGVLFGVVGVGALPGLVPLVICGLINVPFAKILQHCMAQFMISQDERLRSTSEILNSMKIIKLQSWEDKFKNLVENLRAKEFIWLSKSQMMKSYGTFLYWMSPTIVSAVVFLGCALFNSAPLNAGTIFTVFATLRNLSEPVRMIPEALSMMIQVKVSFDRLNTVLLDEELDSSNANRRNINQSSVNAVEIQAGNFIWDHESVFPTLRDVNLQIEQGQKIAVCGPVGAGKSSLLFAVLGEFPKISGTVNVSGTVAYVSQTSWIQSGTVRDNILFGKPMDKTRYDDAIKVCALDKDINDFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMMALREKTVILVTHQVEFLSQVDTILVMEGGKVTQAGNYVNLLTSGTAFEQLVSAHKEAISELEQNNENKTHTEESQGFYLTKNQSEGEICYKGQLGVQLTQEEEKEIGDVGWKTIWDYISFSRCSMMLCWIILGQFAFVVLQAASTFWLVQAIEIPKLSSVTLIGVYSLISFGGTAFAFLRTSIGAHLGLKASTAFFSSFTTSIFNAPMLFFDSTPVGRILTRASSDLTILDFDIPFSITFVASVPIEILMIIGIMVYVTWQVLIVAVPAMVASKYVQGYYQASARELIRINGTTKAPVMNFAAETSLGLVTVRAFNMADRFFKNYLKLVDTDAALFFYSNAAMEWLVLRIETLQNLTVITAALLLVLVPQGYVSPGLVGLSLSYTFTLTGTQIFLTRWYCNLLNYIISVERIKQFIQLPEEPPAIVEDNRPPSSWPSKGRIDLQALEIRYRPNAPLVLKGITCTFKEGSRVGVVGRTGSGKSTLISALFRLVEPASGDILIDGINICSIGLKDLKIKLSIIPQEPTLFKGSIRTNLDPLGLYSDDDLWKALEKCQLKETISRLPNLLDSLVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQQIIRQEFAKCTVITVAHRVPTVIDSDMVMVLSYGKLVEYDEPSKLMDTNSSFSKLVAEYWSSCRKNSPQTLAGSNIE* 1468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0099 1467 ProSitePatterns ABC transporters family signature. 728 742 IPR017871 GO:0005524
Gso7g0099 1467 Gene3D - 1197 1448 IPR027417 -
Gso7g0099 1467 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 284 568 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso7g0099 1467 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 63 1457 - -
Gso7g0099 1467 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 602 825 IPR027417 -
Gso7g0099 1467 Coils Coil 824 844 - -
Gso7g0099 1467 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1216 1448 IPR003439 GO:0005524
Gso7g0099 1467 Gene3D ABC transporter type 1, transmembrane domain 866 1195 IPR036640 GO:0005524|GO:0016021
Gso7g0099 1467 Gene3D ABC transporter type 1, transmembrane domain 260 584 IPR036640 GO:0005524|GO:0016021
Gso7g0099 1467 SUPERFAMILY ABC transporter transmembrane region 887 1196 IPR036640 GO:0005524|GO:0016021
Gso7g0099 1467 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 605 826 IPR003439 GO:0005524
Gso7g0099 1467 CDD ABCC_MRP_domain1 603 803 - -
Gso7g0099 1467 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1204 1447 IPR027417 -
Gso7g0099 1467 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 902 1177 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso7g0099 1467 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 63 1457 - -
Gso7g0099 1467 CDD ABC_6TM_ABCC_D2 898 1189 IPR044726 GO:0140359
Gso7g0099 1467 SMART AAA_5 1240 1432 IPR003593 -
Gso7g0099 1467 SMART AAA_5 630 803 IPR003593 -
Gso7g0099 1467 CDD ABCC_MRP_domain2 1212 1432 - -
Gso7g0099 1467 SUPERFAMILY ABC transporter transmembrane region 272 582 IPR036640 GO:0005524|GO:0016021
Gso7g0099 1467 Pfam ABC transporter 1231 1379 IPR003439 GO:0005524
Gso7g0099 1467 Pfam ABC transporter 621 755 IPR003439 GO:0005524
Gso7g0099 1467 Pfam ABC transporter transmembrane region 284 548 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso7g0099 1467 Pfam ABC transporter transmembrane region 920 1163 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso7g0099 1467 CDD ABC_6TM_ABCC_D1 285 576 IPR044746 GO:0140359
Gso7g0099 1467 Gene3D - 610 857 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0099 Gso-Chr7 884707 889693 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0099 603 867 Calmodulin-binding Proteins AT2G36910 25.874 7.86e-23 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0099 - - gmx:100790301 2784.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0099 7 884707 889693 Gso7g0099 7 884707 889693 ECH