Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0096 ATGGCTTCAAACTCTGCGGCGGAAGGAGTATCAATGGGCGACGATTACGAAGCCTTGATTGCAACCACCGACGCGGAGCTTCTGAAGCGAGCATGGCGCAACGAGAAGGCAGCCCCCGAGATTCTCCGCTACGAATCTGATTTGGTTTCCCGCGTCAAGAAAGTCATTCAATTCATGGAAGAAACTGTGGAGGAGAAATCCAGTGGCGGTACTAATCCTCTTTCAGTGTCTCTGTATCAGATGGACTTGGATAGAACTCTCTTTCTGTTAAGATCTTATCTCAGGATCCGCATCCAGAAGATTGAAAAGTTCGTGTTCCACATCCAAAAAACTGAAGAACTTTGGAACAGGCTATCTAAAGACGAGAAAGATTTTGCCAAAGCGTGTGAAAATGACCTAAAGCAACATCTGGATGAGAGCGTTCTGTTGAAGTTGCCTAAAGATTATAAGTCTGTTCTGAGGCAATCTTCAATGAGTGAAGAGGATGACATGGTCCCAGAACCACAACTAGACACATTTGTTTTGTGTAGAAGTAAAGAGTATCTCACGGGCATTCAGCTCGAAGATGGACCTGTTGATGACAGGTCGAAGCTGTTTGAGATGGAGCCTGGTGTCCTCCACTTCATATGTTACAAATCAATATAG 645 0.4496 MASNSAAEGVSMGDDYEALIATTDAELLKRAWRNEKAAPEILRYESDLVSRVKKVIQFMEETVEEKSSGGTNPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKFVFHIQKTEELWNRLSKDEKDFAKACENDLKQHLDESVLLKLPKDYKSVLRQSSMSEEDDMVPEPQLDTFVLCRSKEYLTGIQLEDGPVDDRSKLFEMEPGVLHFICYKSI* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0096 214 PIRSF GINS_Sld5 1 214 IPR008591 GO:0006261
Gso7g0096 214 SUPERFAMILY GINS helical bundle-like 22 153 IPR036224 -
Gso7g0096 214 Pfam GINS complex protein 49 123 IPR021151 -
Gso7g0096 214 PANTHER SLD5 PROTEIN 7 214 IPR008591 GO:0006261
Gso7g0096 214 Gene3D - 11 214 - -
Gso7g0096 214 SUPERFAMILY PriA/YqbF domain 170 214 - -
Gso7g0096 214 CDD GINS_A_Sld5 24 142 IPR038749 -
Gso7g0096 214 Pfam DNA replication complex GINS protein SLD5 C-terminus 168 214 IPR031633 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0096 Gso-Chr7 847103 850373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0096 1 173 Core DNA Replication Machinery Family AT5G49010 59.538 1.94e-65 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0096 K10735 - gmx:100814216 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0096 7 847103 850373 Gso8g1610 8 15739790 15743333 GST