Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0093 ATGAAAATTTTAACCGTAAGATCAATGGAGGAAACTCCTAAGCTCCTCCATGGAACAATTGAAGCTACTATCTTCAATGCGTCACCTTACTCACCTTTATTTCCCTTCAATTGCATATGTGCAAATGGAAATCCTGCTTATGTGACTATAAAGATAGACAGCCAGAAGTTAGCAAAAACCAGCCACGAAAGCAACCGTGTGTGGAACCAAACTTTTCAGATTCAATGTGCTCATCCAGCTGATTCATGCATCACCATAACACTGAAAACATCGAGTTCTTCCATATTGGGGAAGTTCCATATTCAGGCTCAGCAGCTACTGAAGAAAGGAGGTTTGATCAATGGTTTCTTCCCTCTCCTCATGGATAATGGAAAACCAAACCCAAAACTTAAATTGAAGTTCCAGTTATGGTTCAAGCCGGCAGAATTAGAACCAAGTTGGGCAAAGATGTTGAGCAATGACTGGGAATTTCAAGGGCTGAGGGAGGCTACCTTCCCACTAAGGTCCAATTGTCAGGTCAAACTTTACCATGATGCTCACCATTCTTCTGCTTTTCAACCTCCATTTGATCTATGTGGAGCTCCAAAAAAGCTATGGGAGGATGTCTATAAAGCCATTGAGGGTGCAAAGTATTTAGTTTATATTGCAGGGTGGTCCTTCAATCCCATGATGGTTCTGGTTAGAGATCCTCTCACAGAAATCCCACGTGCCAGAGGAATAAAGTTAGGTGAACTATTGAAGAAGAAGGCAGAGGAAGGAGTGGCTGTGAGGGTTATGCTTTGGGATGATGAAACATCTTTACCCTTTGTTATGAACAAAGGTGAGCTGAACAACCAAGATGAGGAAGCTTTTGCTTATTTCAACCACACAAAAGTAATATGCAGAAAGTGTCCCAGGTCACACCATATGTTCCCCACACTCTTTGCTCACCATCAGAAGACTATAACAGTGGACACCAAAGCACCCAAATCTGTCGGTGACAGAGAACTTATGAGCTTTCTGGGTGGATTAGATCTGTGTGATGGAAGATATGACACAGAGCAACATTCATTGTTTCAAACACTCATTAGGGAATCTCATTGTTATGACTTCTACCAAACAAGCATTGAAGGAGCTAGCCTCAACAAAGGAGGGCCAAGAGAACCTTGGCATGATGCTCATGCTTGTGTTACTGGTGAGGCTGCTTGGGATGTGTTAACCAATTTTGAGCAAAGATGGACAAAGCAATGTGATCCTTCTTTTCTAGTCCCTTCTAGCACCTTAGCAAATCTTATGCCTAGGACAAGCTCAAGCACTCCTATGGAGAGGAATTGGAAAGTTCAAGTATACAGGTCAATTGACCATGTCTCAGTTGGTGAGTTGTCTACAAAGTTAAATGTGGAGAGGAGCATCCATGAGGCTTATGTTGAAGCAATTAGGCGTGCTGAAAGGTTTATTTACATTGAAAACCAATGTTTCATTGGGGGGTGCCATTGGTGGAAGAAAGATAGGCACAGTGGCTGCACTAATCTAATTCCAATTGAAATTGCACTAAAGGTGGTAAGTAAGATTAAGGCAAAGGAGAGATTTTCCGTGTACATAGTCATACCAATGTCGCCAGAAGGAGAGCCTGAAAGTGAACCTGTTCAAGATATACTGCATTGGACCCGAGAAACAATGGCAATGATGTATAGGTTGATTGGAGACGCAATACAAGAAAGTGGAGAACCAGCACACCCTAGAGACTACTTGAATTTCTTCTGTCTTGCAAATAGGGAGCAGAAGGGACAAGGGGAGTATCTTCCACTAGATTCTCCCCAACCTGAAACTCAATACTGGAATGCTCAAAAAAATAGGAGATTCATGGTTTATGTTCACTCCAACTTCATGATAGTGGACGACCTGTACATATTGATAGGATCAGCTAATGTAAACCAAAGATCCATGGACGGGCAAAGGGACACTGAGATAGCCATTGGATGCTACCAGTCTCAAGATGGAGATGATAACAACCAAATGAACCTAGATGATATTCAAGCATATAGAATGTCTCTATGGTATGAGCACACTGTTAGTGTTGATGAGTTGTTCTTAGAGCCAGAAAGATTGGAATGTGTGGAGAGAATGCGCTCAATAGGAGATGAAATGTGGGAAATCTACAGCAGTGAAGAAATTGTGGACATGGAAGGTGTGCACCTTGTAACTTACCCTGTGAGAGTAACACAAGAAGGGTATGTGAAAGACCTCACTGATGGAGTTCACTTTCCTGATACAAATTCTTTAGTGAAAGGGAAAAGGTCTAAAATATTGCCCCCTATCTTTACCACTTAG 2310 0.4199 MKILTVRSMEETPKLLHGTIEATIFNASPYSPLFPFNCICANGNPAYVTIKIDSQKLAKTSHESNRVWNQTFQIQCAHPADSCITITLKTSSSSILGKFHIQAQQLLKKGGLINGFFPLLMDNGKPNPKLKLKFQLWFKPAELEPSWAKMLSNDWEFQGLREATFPLRSNCQVKLYHDAHHSSAFQPPFDLCGAPKKLWEDVYKAIEGAKYLVYIAGWSFNPMMVLVRDPLTEIPRARGIKLGELLKKKAEEGVAVRVMLWDDETSLPFVMNKGELNNQDEEAFAYFNHTKVICRKCPRSHHMFPTLFAHHQKTITVDTKAPKSVGDRELMSFLGGLDLCDGRYDTEQHSLFQTLIRESHCYDFYQTSIEGASLNKGGPREPWHDAHACVTGEAAWDVLTNFEQRWTKQCDPSFLVPSSTLANLMPRTSSSTPMERNWKVQVYRSIDHVSVGELSTKLNVERSIHEAYVEAIRRAERFIYIENQCFIGGCHWWKKDRHSGCTNLIPIEIALKVVSKIKAKERFSVYIVIPMSPEGEPESEPVQDILHWTRETMAMMYRLIGDAIQESGEPAHPRDYLNFFCLANREQKGQGEYLPLDSPQPETQYWNAQKNRRFMVYVHSNFMIVDDLYILIGSANVNQRSMDGQRDTEIAIGCYQSQDGDDNNQMNLDDIQAYRMSLWYEHTVSVDELFLEPERLECVERMRSIGDEMWEIYSSEEIVDMEGVHLVTYPVRVTQEGYVKDLTDGVHFPDTNSLVKGKRSKILPPIFTT* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0093 769 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 15 136 IPR035892 -
Gso7g0093 769 PIRSF PLD_plant 6 769 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Gso7g0093 769 Pfam Phospholipase D Active site motif 307 343 IPR001736 GO:0003824
Gso7g0093 769 SUPERFAMILY Phospholipase D/nuclease 164 416 - -
Gso7g0093 769 Pfam C2 domain 46 119 IPR000008 -
Gso7g0093 769 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 306 343 IPR001736 GO:0003824
Gso7g0093 769 Pfam Phospholipase D C terminal 687 758 IPR024632 -
Gso7g0093 769 PANTHER PHOSPHOLIPASE D ALPHA 9 769 - -
Gso7g0093 769 SUPERFAMILY Phospholipase D/nuclease 433 697 - -
Gso7g0093 769 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 614 641 IPR001736 GO:0003824
Gso7g0093 769 SMART pld_4 306 343 IPR001736 GO:0003824
Gso7g0093 769 SMART pld_4 614 641 IPR001736 GO:0003824
Gso7g0093 769 Gene3D C2 domain 38 139 IPR035892 -
Gso7g0093 769 PANTHER PHOSPHOLIPASE D 9 769 IPR015679 -
Gso7g0093 769 Gene3D Endonuclease Chain A 184 437 - -
Gso7g0093 769 Gene3D Endonuclease Chain A 453 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0093 Gso-Chr7 829768 833468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0093 38 769 Phospholipase D Gene Family (Wang group) AT1G55180 62.180 0.0 948
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0093 K01115 - gmx:100789235 1553.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0093 7 829768 833468 Gso7g0093 7 829768 833468 ECH
Gso7g0093 7 829768 833468 Gso8g1607 8 15722965 15726855 GST
Gso15g0209 15 1871694 1875030 Gso7g0093 7 829768 833468 PCT
Gso7g0093 7 829768 833468 Gso15g0209 15 1871694 1875030 PCT