Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0084 ATGGGACTGCCGCTTATTTTCTTGCTAATTGAGCTGCATTTAGTGGTCAGCACTCAGCAGGTCCATGAATATGCAGCCACCAAGCTGCAACATTCCAGTGACAGAAACCATTTTAGTATTGCAATCCCACCAACAAAGTCATCTTCTGAAGGTCATTCAAGTATTGCACACCCACCTTCCGAGTCATCTTCTGGTGTACCTGCAAGTATTGCACTTTCACCTTCCAAGTCAATTCACAAAGCTCCTAGAATTATATGGACACATGGTTCTGTGGATTCTCCTGTATCACATCATAAGCATTACCATTCCAAAAGAAAGTCCCACAATCCAACTCCAGCGCCAACCTACCCAGTCCAGGCTCCTTCATACAGTCATCAAGGCCCTTCAGTCTTCAGATGGAAACCTCCTTTCTCTTCACCAAAAAGTAGGGATGTTCATGCCCCTGCACCTGCACCATCACCAGCAATTCTGCCAGGTCACCTTGATGTACCCTCTCCTTCACCTAGAATTTCTCCTCTAGGTTCATCATTGAAGAAGAAAAAGACTCCACCACCAGCATATACATTGGTTCTGCCACCGCCACCTCCTAATAAGGATTGCTTGTCGATGACTTGCTCAGAGCCCTTGACATATACACCTCCTGGGTCACCTTGTGGTTGTGTATGGCCGCTTCAGGTTAAACTCCATATTAACATTGCAATATACAAGGTTTTTCCTTTGGTCTCAGAGCTAGCCAAGGAAATTGCAGCAAGTGTTCTGCTGAACCATTCCCAGGTTCGCATTGTGGGAGCTGATGCAGCTAATCAGCAACTAGAGAAAACCACTGTTCTCATAGACTTAGTACCCAAAGGAGTAAAATTTGATGATACCACCGCATTTTTAATATATAAGAAATTCTGGCACAGGGAGATTCTGATAGATGCTTCAGTCTTTGGTGCTTATGAAGTACTCTATGTTCATTATCCAGGTCTTCCACCTTCTCCACCTTCAACTCCACAAGATGCTTCTGGTATAGATGATGGGCCAAGTCCAGGACATGATAACAATGGAACGATGATGAAACCTTTAGGAGTAGATGTCCCAAAGAAGAAAAAAGAAGGGAATAATGGAAGAATGATTGTTATAATTGTGCTGTCATCAGTTACTGCTTTTGTTGTATTCATTGGTCTTGCTTGGCTTTGTCTGCTGAAATGCCGCTCCTATGTTCATGAACATGAACCAGTTCCAGATGGTTTTATTTCACCCTCTTCTAAACAATCAACAGGGGCTGCTAGGTCATTAACTCAAGGGATCAGGCTAGGCTCTGGATCACAGTCCTTCAATTCTGGAACAATAACATATACAGGGTCTGCTAAGATTTTTACTTTGAATGACTTGGAGAAAGCAACAGATAACTTTGATTCTTCAAGAATATTAGGAGAAGGTGGCTTTGGGCTTGTTTACAAAGGTATTCTAAATGATGGGAGGGATGTAGCTGTGAAGATTCTCAAAAGAGATGATCAGCGAGGTGGCCGTGAATTCTTGGCAGAAGTTGAGATGCTTAGCCGTCTACATCATAGAAATTTAGTTAAATTACTAGGTATATGCATAGAGAAACAGACTCGCTGCTTAGTTTATGAGCTTGTCCCTAATGGAAGTGTGGAATCCCACTTACATGGAACTGACAAGGAAAATGATCCACTTGATTGGAATTCCCGGATGAAGATTGCTCTTGGTGCAGCTCGGGGATTGGCCTATCTGCATGAAGATTCAAATCCATGTGTCATACATCGAGACTTCAAGGCCAGCAACATCTTGTTGGAGTACGATTTTACACCCAAGGTCTCAGATTTTGGATTGGCTAGAACAGCACTGGATGAGAGAAACAAGCACATCTCCACACATGTTATGGGAACATTTGGCTACTTAGCTCCTGAATATGCAATGACTGGCCATCTTCTGGTCAAGAGTGACGTTTATAGTTATGGAGTTGTACTCCTTGAGCTCCTAACTGGAAGAAAGCCTGTGGATTTGTCACAACCGCCAGGTCAAGAGAATCTTGTGACATGGGTTCGTCCACTTCTCACAAGTAAGGAGGGTTTGCAGATGATCGTAGACCCATTTGTAAAGCCTAACATTTCTGTTGATATTGTGGTAAAAGTTGCAGCAATTGCATCCATGTGTGTGCAACCAGAAGTCTCCCAACGTCCTTTCATGGGAGAAGTTGTTCAGGCCTTGAAGCTAGTATGCAGTGACTTTGAGGAAACAGACTTTATAAGATCAAAAAGTTCTCAAGAGGGTCTTCTAACTGATGTGGAAGGAAAGTATTCTGAAGCTTCAGTTGAAAGAGTAGAATTTTCAGAGTATCAAAAAACTCTTTCTGGCTATCAATCTGGTGAAGAAAAGGTAAGATTATCAGCAACAGAGTTGCTCAGTACTTCAGGTCAGGAATTTGAGTCATTCAGGAGGTATTCTCGTTCAGGGCCTCTAACTATTGGGAAGAAAAGGCAGTTCTGGCAGAAGTTGAGAAGTTTGTCTAGAGGTAGCTCCAGTGAACATGGATCCCATTAA 2550 0.4282 MGLPLIFLLIELHLVVSTQQVHEYAATKLQHSSDRNHFSIAIPPTKSSSEGHSSIAHPPSESSSGVPASIALSPSKSIHKAPRIIWTHGSVDSPVSHHKHYHSKRKSHNPTPAPTYPVQAPSYSHQGPSVFRWKPPFSSPKSRDVHAPAPAPSPAILPGHLDVPSPSPRISPLGSSLKKKKTPPPAYTLVLPPPPPNKDCLSMTCSEPLTYTPPGSPCGCVWPLQVKLHINIAIYKVFPLVSELAKEIAASVLLNHSQVRIVGADAANQQLEKTTVLIDLVPKGVKFDDTTAFLIYKKFWHREILIDASVFGAYEVLYVHYPGLPPSPPSTPQDASGIDDGPSPGHDNNGTMMKPLGVDVPKKKKEGNNGRMIVIIVLSSVTAFVVFIGLAWLCLLKCRSYVHEHEPVPDGFISPSSKQSTGAARSLTQGIRLGSGSQSFNSGTITYTGSAKIFTLNDLEKATDNFDSSRILGEGGFGLVYKGILNDGRDVAVKILKRDDQRGGREFLAEVEMLSRLHHRNLVKLLGICIEKQTRCLVYELVPNGSVESHLHGTDKENDPLDWNSRMKIALGAARGLAYLHEDSNPCVIHRDFKASNILLEYDFTPKVSDFGLARTALDERNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVTWVRPLLTSKEGLQMIVDPFVKPNISVDIVVKVAAIASMCVQPEVSQRPFMGEVVQALKLVCSDFEETDFIRSKSSQEGLLTDVEGKYSEASVERVEFSEYQKTLSGYQSGEEKVRLSATELLSTSGQEFESFRRYSRSGPLTIGKKRQFWQKLRSLSRGSSSEHGSH* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0084 849 Gene3D Phosphorylase Kinase; domain 1 439 541 - -
Gso7g0084 849 CDD STKc_IRAK 472 740 - -
Gso7g0084 849 MobiDBLite consensus disorder prediction 328 361 - -
Gso7g0084 849 PANTHER OS01G0750732 PROTEIN 7 847 - -
Gso7g0084 849 MobiDBLite consensus disorder prediction 35 70 - -
Gso7g0084 849 MobiDBLite consensus disorder prediction 108 126 - -
Gso7g0084 849 SUPERFAMILY Protein kinase-like (PK-like) 445 739 IPR011009 -
Gso7g0084 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 588 600 IPR008271 GO:0004672|GO:0006468
Gso7g0084 849 ProSitePatterns Protein kinases ATP-binding region signature. 472 494 IPR017441 GO:0005524
Gso7g0084 849 MobiDBLite consensus disorder prediction 89 185 - -
Gso7g0084 849 ProSiteProfiles Protein kinase domain profile. 466 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0084 849 PANTHER OS01G0750732 PROTEIN 7 847 - -
Gso7g0084 849 Pfam Protein tyrosine and serine/threonine kinase 469 739 IPR001245 GO:0004672|GO:0006468
Gso7g0084 849 Gene3D Transferase(Phosphotransferase) domain 1 542 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0084 Gso-Chr7 732032 737994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0084 197 848 Receptor kinase-like Gene Family AT5G56890 59.939 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gso7g0084 PK_Tyr_Ser-Thr 3.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0084 - - gmx:100814040 1612.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0084 7 732032 737994 Gso8g1597 8 15619037 15625338 GST
Gso15g0216 15 1962762 1968526 Gso7g0084 7 732032 737994 PCT
Gso11g3595 11 51643715 51649289 Gso7g0084 7 732032 737994 PCT
Gso7g0084 7 732032 737994 Gso15g0216 15 1962762 1968526 PCT
Gso7g0084 7 732032 737994 Gso11g3595 11 51643715 51649289 PCT