Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0081 ATGAACAACAATAACCCTAACAACAACAACACCAATAACAGAATCTCAACACCAAGAAATGGCAACAGCGCCACCCAGGCCTGTGCTGCATGCAAGTACCAACGCAGAAAGTGTGCACCTGATTGCATCCTTGCACCTTACTTCCCCCATGATCGCCAGCGCCAGTTCCTCAACGCGCACAAGTTGTTCGGCGTGAGCAACATCACCAAGATCATCAAGCTTCTCAGCCCTCAGGACAAGGACCAAGCCATGCGCACCATCATCTATCAATCCGACATGCGCGCTACAGACCCAGTTGGTGGTTGCTACAGGTACATTCTCGAACTCCAGGCCCAAATCGAGTACTATAGGGCGGAACTCGAACTCGTCCTTCAACAACTCGCCATCTTCAGAGCCCAGGCTCAGCACCAACACCAACAACAACATGGTATCTTTGCTGCAAACAACGTTAATGTAGCTGTCAATGGTGATGGTGAGGTTTTGAACGGTGATCCAATGGGCTTGTATAACCAGCAACAACACTATCAGTGTCTGCAGGCACAACAGGGGGAGGAGCAGTATGTTATGATGCACGAAAATGGTAATGGAAGCCAAAACATCGATGGCATTGCTTTGCAGGAGCAAATTAAAACGTGGGCTGTGCAGAACACTGCTGTGTCGCTTTCTTCGTTGTCATTGCATGGGCAGAATAGTAATGTCAGCGATGAGTATGATCACAAGCCGGTGGTGGGGATTGACATGGATTCTGATGAGAGAAGCGAGTTAGGGTTCGAGTCTGAAGAATTAGTCCATCGCAGTGATGAAGCAGTTTTGTTTAAGATAGACGATGCAGTAATAAAAGCGGAGGCTAATCCCTGCATGCAACAAGCTCAAGACCATGACCTGAAAGGTGCAGCAACATCGTTTACTCTCACAAATTGTAGTTGCTGA 930 0.4806 MNNNNPNNNNTNNRISTPRNGNSATQACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKLLSPQDKDQAMRTIIYQSDMRATDPVGGCYRYILELQAQIEYYRAELELVLQQLAIFRAQAQHQHQQQHGIFAANNVNVAVNGDGEVLNGDPMGLYNQQQHYQCLQAQQGEEQYVMMHENGNGSQNIDGIALQEQIKTWAVQNTAVSLSSLSLHGQNSNVSDEYDHKPVVGIDMDSDERSELGFESEELVHRSDEAVLFKIDDAVIKAEANPCMQQAQDHDLKGAATSFTLTNCSC* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0081 309 MobiDBLite consensus disorder prediction 1 22 - -
Gso7g0081 309 ProSiteProfiles LOB domain profile. 26 127 IPR004883 -
Gso7g0081 309 Coils Coil 106 126 - -
Gso7g0081 309 Pfam Lateral organ boundaries (LOB) domain 27 122 IPR004883 -
Gso7g0081 309 PANTHER LOB DOMAIN-CONTAINING PROTEIN 22 21 243 - -
Gso7g0081 309 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 21 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0081 Gso-Chr7 703420 705420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0081 26 142 AS2 family AT3G13850 76.271 7.50e-60 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso7g0081 LOB 3.6e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0081 - - gmx:100786728 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0081 7 703420 705420 Gso8g1593 8 15581881 15584746 GST
Gso11g3592 11 51628579 51629434 Gso7g0081 7 703420 705420 PCT
Gso7g0081 7 703420 705420 Gso11g3592 11 51628579 51629434 PCT