Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0070 ATGGGTGGTTCAGGAAGATGGCTCAAGTCCCTCATTTCTCTCAGAAAGCCCTCCACTATTGATCAAGAGAAGGGTGGTGACAAGAGTAAGAGAAAGTGGAAGTTATGGAAGAGCACTTCAGAAGGGTTTGGGATTGGATCATCAATGCAGAAGGGGCATGGTGGTGGTGGATCCTTTGTGGTGGACGATGGAGCATTTGCTGCTGCTTTGGCTGCTGTGGTCAGAACTCCACTCAAAGACTTTATGGTCATTAAGCAGGAATGGGCTGCCATTCGAATCCAAGCAGTGTTTCGAGGTTTCTTGGCAAGACGAGCTTTGAGGGCCCTGAAGGCAGTGGTGAGGTTGCAAGCTATATTTCGTGGTTGGCAAGTTAGAAAGCAAGCAGCTGTTACTCTAAGGTGCATGCAGGCTCTTGTGCGAGTTCAAGCACGCGTCAAGGCAAGGAATGTGGGGAACTCTCAAGAAGGGAAATCTGCGGGTGAGCATTGCAATGAAGCTGATCCTGTTAAGCAAGCTGAGCAAGGGTGGTGTGACATTCCAGGAACTGTAGAAGAAGTTAAGGAAAAATTACAAATGAGGCAGGAAGGAGCAATTAAGAGGGATAGAACAAAGGCATACTCTCAGTCTAAGAAGAAATCAACAGAGAGAGCGAGTTCAAATTCAAGAGCTGCTAAGTCAGTAATTCCTCTCAAGAACCGCAACCTAGACAGCAAGAGCTCGGGATGGAACATGTTAGATCTCTGGATGGCTGCAAAGCCATGGGAGAGCAGGTCAATGGTAGAAATGTATTTGGACTCACCTGACATGACTCCAGTGACCAGTAAAAGTGATCATCTTGTTCTTCCCTTTAATTCGGATCAACAAAATGGCTCAGTCAAATCAAGAAGCAATGGTGTGACAACCAGGATTTCAACTAATTCTCTTACAACTAGTCAATCAACTCCATCATCTTCAGCCATAAGCTCTGAATGCATGCATGATGATAGTCCTATGTCAACCTCATGCACATCTGGATCACCATCTCGACCATCTAACAACAATGTTACGGTGGAAGCAACAGAGGAAAGAAATGCCTGTAAACCAAGCTACATGAATCTGACAGCATCTACCAAAGCTAAACTGAAACCCTATAGGTGTTTTTCTCAGAATGCGAAGAGAATCTTTATGGATGATTGTGTGTCACTAAGTGGAGTTACTAGAAGCAGTTCTGGTTTCTATCCTTCTGCTAATACATGGAAGAATCTCTATGCAACACCTCTAAGAACAAGTTATCAAAAACGATATACAATGGAATATAAGTAG 1302 0.4424 MGGSGRWLKSLISLRKPSTIDQEKGGDKSKRKWKLWKSTSEGFGIGSSMQKGHGGGGSFVVDDGAFAAALAAVVRTPLKDFMVIKQEWAAIRIQAVFRGFLARRALRALKAVVRLQAIFRGWQVRKQAAVTLRCMQALVRVQARVKARNVGNSQEGKSAGEHCNEADPVKQAEQGWCDIPGTVEEVKEKLQMRQEGAIKRDRTKAYSQSKKKSTERASSNSRAAKSVIPLKNRNLDSKSSGWNMLDLWMAAKPWESRSMVEMYLDSPDMTPVTSKSDHLVLPFNSDQQNGSVKSRSNGVTTRISTNSLTTSQSTPSSSAISSECMHDDSPMSTSCTSGSPSRPSNNNVTVEATEERNACKPSYMNLTASTKAKLKPYRCFSQNAKRIFMDDCVSLSGVTRSSSGFYPSANTWKNLYATPLRTSYQKRYTMEYK* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0070 433 MobiDBLite consensus disorder prediction 193 235 - -
Gso7g0070 433 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 432 - -
Gso7g0070 433 MobiDBLite consensus disorder prediction 219 235 - -
Gso7g0070 433 MobiDBLite consensus disorder prediction 271 347 - -
Gso7g0070 433 Gene3D - 84 138 - -
Gso7g0070 433 PANTHER IQ-DOMAIN 5-RELATED 1 432 - -
Gso7g0070 433 Pfam IQ calmodulin-binding motif 110 127 IPR000048 GO:0005515
Gso7g0070 433 Pfam IQ calmodulin-binding motif 88 107 IPR000048 GO:0005515
Gso7g0070 433 ProSiteProfiles IQ motif profile. 86 114 IPR000048 GO:0005515
Gso7g0070 433 SMART iq_5 85 107 IPR000048 GO:0005515
Gso7g0070 433 SMART iq_5 108 129 IPR000048 GO:0005515
Gso7g0070 433 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 128 IPR027417 -
Gso7g0070 433 MobiDBLite consensus disorder prediction 193 218 - -
Gso7g0070 433 ProSiteProfiles IQ motif profile. 110 137 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0070 Gso-Chr7 613253 616194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0070 1 416 IQD Protein Family AT1G72670 44.213 1.58e-88 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0070 - - gmx:100784093 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0070 7 613253 616194 Gso8g1584 8 15476603 15479518 GST
Gso15g0226 15 2062091 2064793 Gso7g0070 7 613253 616194 PCT
Gso11g3582 11 51546036 51549203 Gso7g0070 7 613253 616194 PCT