Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0054 ATGGGTGTGAACTCTTACTCCAACAGCATGAAGATCCAAGCCGAGATACAAATGCCACCCTTAGAAATCCACAAGGTTCGTTTGCCACCAGAACGCACCACCTTGCAGAAACTCAGACACAGACTCTCTGAGATCTTCTTCCCAGATGATCCACTCCACAGGTTCAAGAACCAAACATGCCTCATCAAGCTCCTCCTTGCACTTCAATACTTTTTCCCCATTTTCCAATGGGCCCCTCTCTACAACCTTTCCCTTCTCCGCTCTGACATCATCTCTGGTCTCACCATCGCTAGCCTCGCCATTCCTCAGGGAATCAGCTATGCTAAGCTTGCAAACTTGCCACCTATTCTTGGATTATATTCCAGTTTTGTGCCCCCGTTGATATATTCCCTGCTTGGAAGTTCTAGACATCTTGGTGTTGGTCCAGTTTCAATTGCATCTTTGGTCATGGGATCAATGTTAAGCGAGACCGTTTCTTATAGTCAAGATCCAATTCTCTATCTTAAAATGGCCTTCACTGCCACTTTCTTTGCCGGTTTGTTCCAATCTTCTCTGGGTATATTAAGGTTAGGCTTTGTAATTGATTTTCTCTCAAAGGCAACACTGGTGGGTTTTATGGCTGGTGCAGCGATTATTGTGTCACTGCAACAGCTGAAAGGGTTGCTTGGAATAGTTCATTTCACCAACAAGATGCAAATAACACCTGTACTGATTTCTGTTTTCAAGCAAAGAGACGAGTGGTCATGGCAAAACCTTTTGTTGGGATTCAGTTTCCTACTATTCCTGTTGACAACAAGGCACATTAGCCTGAAGAAGCCAAAATTATTCTGGGTTTCAGCAGCTGCCCCATTGACATCAGTTATTCTGTCAACCATTTTCGTATTTATTCTGAGAAATAAGACACATAAAATTGCTATTATTGGTGGATTGCCAAAGGGACTTAATCCACCATCATCAAACATGTTATACTTCAATGGTCCTTATTTGGCTCTTGCTATTAAAACAGGACTTGTCACTGGGATCTTGTCTCTGACTGAAGGAATCGCAGTAGGAAGAACATTTGCTGCACTTAAGAATTACCAGGTGGATGGAAACAAAGAAATGATGGCCATTGGTCTTATGAACATAGCTGGCTCTTGTTCTTCATGCTATGTCACAACAGGATCCTTTTCTCGATCAGCTGTTAACTACAATGCCGGGGCACAGACTGCGGTCTCAAATATAATCATGGCATCAGCAGTTCTTGTGACCCTTTTGTTTCTGATGCCACTGTTCTATTACACACCGAATGTAGTCTTAGCAGCCATTATCATCACTGCTGTTTCAGGGCTAATAGATTATCAAGCTGCATATAAATTGTGGAAGGTTGACAAGCTTGATTTCTTGGCCTGCTTGTGCTCCTTTTTCGGTGTTCTGTTCATTTCAGTGCCTTTAGGCCTTGGAATAGCGGTGGCAATATCAGTCTTCAAGATCTTGCTTCATGTCTCTAGGCCAAACACACTGGTTTTGGGGAATATACCAGGGACGCCAATATTCCACAACCTAAACCAATATAGAGAAGCTTTGAGGATCCCTTCATTTATCATTTTGGCTGTTGAGTCTCCCATCTACTTTGCTAATTCAACGTACCTACAAGAAAGGATACTGAGATGGGTTCGAGAAGAGGAAGAGCGAGTAAAAGCAAACAATGAGAGTACTTTGAAGTGCATAATTTTGGACATGACAGCTGTTACTGCCATAGACACAAGTGGAATTGATACTCTATGTGAACTCAGAAAGGTGCTGGAAAAAAGATCACTTCAGCTTGTGTTGACAAATCCTGTTGGAAATGTGATGGAAAAGTTGCATCAGTCAAATATTTTGGATTCCTTTGGGTTGAAAGGAGTCTATCTCTCAGTAGGAGAAGCTGTGGCTGACATTTCATCTTCTTGGAAAGCTCAGCCTTGA 1947 0.4242 MGVNSYSNSMKIQAEIQMPPLEIHKVRLPPERTTLQKLRHRLSEIFFPDDPLHRFKNQTCLIKLLLALQYFFPIFQWAPLYNLSLLRSDIISGLTIASLAIPQGISYAKLANLPPILGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSETVSYSQDPILYLKMAFTATFFAGLFQSSLGILRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGIVHFTNKMQITPVLISVFKQRDEWSWQNLLLGFSFLLFLLTTRHISLKKPKLFWVSAAAPLTSVILSTIFVFILRNKTHKIAIIGGLPKGLNPPSSNMLYFNGPYLALAIKTGLVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGLMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNIIMASAVLVTLLFLMPLFYYTPNVVLAAIIITAVSGLIDYQAAYKLWKVDKLDFLACLCSFFGVLFISVPLGLGIAVAISVFKILLHVSRPNTLVLGNIPGTPIFHNLNQYREALRIPSFIILAVESPIYFANSTYLQERILRWVREEEERVKANNESTLKCIILDMTAVTAIDTSGIDTLCELRKVLEKRSLQLVLTNPVGNVMEKLHQSNILDSFGLKGVYLSVGEAVADISSSWKAQP* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0054 648 PANTHER SLC26A/SULP TRANSPORTER-RELATED 11 648 - -
Gso7g0054 648 Pfam Sulfate permease family 86 465 IPR011547 GO:0016021
Gso7g0054 648 SUPERFAMILY SpoIIaa-like 522 639 IPR036513 -
Gso7g0054 648 ProSiteProfiles STAS domain profile. 517 640 IPR002645 -
Gso7g0054 648 Pfam STAS domain 518 636 IPR002645 -
Gso7g0054 648 ProSitePatterns SLC26A transporters signature. 115 136 IPR018045 GO:0008271|GO:0008272
Gso7g0054 648 TIGRFAM sulP: sulfate permease 73 636 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gso7g0054 648 PANTHER SULFATE TRANSPORTER 11 648 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gso7g0054 648 Gene3D STAS domain 497 642 IPR036513 -
Gso7g0054 648 CDD STAS_SulP_like_sulfate_transporter 518 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0054 Gso-Chr7 462264 466417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0054 21 648 Inorganic Solute Cotransporters AT3G15990 76.508 0.0 1012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0054 K17471 - gmx:100780331 1253.81