Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0052 ATGAGCGTGGTTGGTTTCGATTTCGGTAACGAGAGTTGCGTTGTTGCGGTTGCGAGGCAGAGAGGGATTGACGTTGTGCTCAATGATGAGTCCAAGCGTGAAACGCCCGCCATTGTGTGCTTCGGTGACAAGCAACGCTTCATTGGCACTGCCGGTGCTGCCTCCACTATGATGAACCCTAAGAATTCAATCTCACAGATTAAGAGACTCATTGGTAGGAAATTCGCTGATCCCGAATTGCAGCGGGATCTTAAGTCATTGCCGTTTCTCGTCACTGAGGGGAGTGATGGGTACCCGTTGATTCATGCGCGATACATGGGTGAGGCCAAGACATTTACGCCTACCCAAGTGTTTGGAATGATGCTGTCGAATCTTAAGGAAATTGCGGAGAAGAATCTCACTACGGCAGTTGTTGATTGTTGCATTGGAATCCCGGTTTATTTCACTGATCTGCAGAGAAGGGCGGTGTTGGATGCGGCCACAATTGCTGGTCTGCACCCGCTTCGGTTGATTCACGAAATGACTGCCACTGCCTTGGCCTATGGGATTTATAAAACGGACCTTCCGGAAAATGATCAGCTGAATGTTGCGTTTGTTGATGTTGGACATGCTAGCTTGCAAGTATGCATTGCTGGATTCAAGAAGGGGCAGCTGAAAGTGTTGGCTCATTCGTATGATAGGTCTTTCGGCGGTAGGGATTTTGATGAGGTTTTGTTCCATCACTTTGCTGAGAAGTTTAAGGACGAGTACAAGATTGATGTTTTTCAAAATGCCAGGGCTTGCATAAGGCTCAGGGCTGCCTGTGAGAAGATCAAGAAGATGCTTAGTGCAAATCCTGAGGCACCTCTCAACATTGAGTGCTTGATGGATGAGAAGGATGTCCGGGGCTTCATCAAGCGAGATGAATTTGAGCAACTAAGTCTTCCAATTTTGGAACGTGTGAAGGGGCCTCTGGAGAAGGCACTTGCTGAAGCAGGTCTTACCGTCGAAAATGTGCACACGGTTGAGGTGGTTGGTTCAGGTTCTCGTGTGCCGGCCATTAACAAAATATTGACAGAGTTTTTCAAAAAGGAGCCTAGGCGGACAATGAATGCTAGTGAGTGTGTTGCTAGGGGATGTGCGTTGGAATGTGCAATTCTTAGTCCAACGTTCAAAGTACGAGAATTTCAGGTCAACGAAAGCCTTCCTTTCTCGATTTCTCTTTCATGGAAAAGTTCTGGTCCAGATGCACAGGACAATGGACCAGAAAATCAGCAGAGTTCCCTTGTTTTTCCCAAGGGTAATCCCATACCAAGTATCAAGGCACTGACATTCTACAGGTCAGGAACATTCTCTGTTGATGTACAATTTGGTGATGTGAGTGGGCTGCAAACACCTGCTAAGATCAGCACCTATACTATTGGTCCTTTCCAAACTACAAATGGTGAAAAGGCAAAAGTTAAAGTGAAAGTTCGTCTGAATCTGCATGGAATTGTATCCCTTGAGTCTGCAACGCTCCTGGAAGAGGAAGAAGTTGATGTTCCAGTTAGCAAAGAAGCAGCAGGGGAAAATACTAAGATGGACATCGATGAAGTCCCAGCTGAGGCCGCTGCACCTCCTTCCTCCAATGACACTGGTGCTAATATGGAAAATGGAAAGGCTAGTATTGATGCCTCTGGGGTTGAAGATGGCATCCCTGAGAGTGGAGGTAAGCCTTTGCAAACAGATACTGATACCAAGGTTCAGGCTCCAAAGAAAAAGGTTAAGAAAACAAACATTCCTGTAGTAGAGTTAATTTATGGAGCAATGGTGCCTGTGGATGTCCAGAAAGCACTAGAGAAGGAGTTTGAAATGGCTTTGCAAGATCGTGTGATGGAAGAAACAAAAGACAAGAAAAACGCAGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACCAAGAGTTTGTCACTGCTTCAGAGAGAGATGATTTTACTGCTAAACTTCAGGAAGTGGAAGATTGGCTTTATGGTGAGGGTGAAGATGAAACTAAAGGTGTATATACTGCCAAGCTTGAGGAACTCAAAAAGCATGGTGATCCAATTGATGAGCGTTACAAAGAATTCATGGAGAGGGGTACTATAATCGAACAGTTTGTCTATTGTATAAATAGTTACAGACAAGTTGCAATGTCGAATGATCCCAGATTTGAGCACATTGACATTAACGAGAAACAGAAGGTCATAAATGAATGTGTTGAAGCTGAAAAGTGGTTTAATGAGAAGCAGCAGCAGCAGAACTCACTTCCAAAATATGCCAACCCTGTACTCTTGTCAGCTGAAATAAGAAAGAAAGCTGAAGCTGTCGATAGGTTCTGCAAGCCGATTATGGCAACACCAAGGCCAACCAAGGCGACTACTCCACCAGGACCAGCAACACATCCATCTTCTCAGAGTGATGAACAGCAGCAGCAGCAGCAACCTCCTCAGGGGGATGCTGATGCCAACAGTAATGAGAATGGTGGGAATAGCAGTAGTCAGGCTGCACCAGCGTCTACTGAACCAATGGAAACTGATAAGTCTGAGAAAACAGCCTCTGCCTAA 2574 0.453 MSVVGFDFGNESCVVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGTAGAASTMMNPKNSISQIKRLIGRKFADPELQRDLKSLPFLVTEGSDGYPLIHARYMGEAKTFTPTQVFGMMLSNLKEIAEKNLTTAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLRLIHEMTATALAYGIYKTDLPENDQLNVAFVDVGHASLQVCIAGFKKGQLKVLAHSYDRSFGGRDFDEVLFHHFAEKFKDEYKIDVFQNARACIRLRAACEKIKKMLSANPEAPLNIECLMDEKDVRGFIKRDEFEQLSLPILERVKGPLEKALAEAGLTVENVHTVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVARGCALECAILSPTFKVREFQVNESLPFSISLSWKSSGPDAQDNGPENQQSSLVFPKGNPIPSIKALTFYRSGTFSVDVQFGDVSGLQTPAKISTYTIGPFQTTNGEKAKVKVKVRLNLHGIVSLESATLLEEEEVDVPVSKEAAGENTKMDIDEVPAEAAAPPSSNDTGANMENGKASIDASGVEDGIPESGGKPLQTDTDTKVQAPKKKVKKTNIPVVELIYGAMVPVDVQKALEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYQEFVTASERDDFTAKLQEVEDWLYGEGEDETKGVYTAKLEELKKHGDPIDERYKEFMERGTIIEQFVYCINSYRQVAMSNDPRFEHIDINEKQKVINECVEAEKWFNEKQQQQNSLPKYANPVLLSAEIRKKAEAVDRFCKPIMATPRPTKATTPPGPATHPSSQSDEQQQQQQPPQGDADANSNENGGNSSSQAAPASTEPMETDKSEKTASA* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0052 857 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 629 IPR029047 -
Gso7g0052 857 CDD HSPA4_like_NDB 2 381 - -
Gso7g0052 857 Gene3D - 38 113 - -
Gso7g0052 857 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 712 792 IPR029048 -
Gso7g0052 857 PRINTS 70kDa heat shock protein signature 2 15 - -
Gso7g0052 857 PRINTS 70kDa heat shock protein signature 30 42 - -
Gso7g0052 857 PRINTS 70kDa heat shock protein signature 140 160 - -
Gso7g0052 857 PRINTS 70kDa heat shock protein signature 332 348 - -
Gso7g0052 857 PRINTS 70kDa heat shock protein signature 363 383 - -
Gso7g0052 857 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 593 IPR029047 -
Gso7g0052 857 Gene3D - 598 708 IPR029048 -
Gso7g0052 857 Gene3D - 186 360 - -
Gso7g0052 857 MobiDBLite consensus disorder prediction 800 844 - -
Gso7g0052 857 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Gso7g0052 857 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 599 696 IPR029048 -
Gso7g0052 857 MobiDBLite consensus disorder prediction 522 579 - -
Gso7g0052 857 ProSiteProfiles Ig-like domain profile. 345 463 IPR007110 -
Gso7g0052 857 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Gso7g0052 857 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 856 - -
Gso7g0052 857 MobiDBLite consensus disorder prediction 783 857 - -
Gso7g0052 857 PANTHER HSC70CB, ISOFORM G-RELATED 1 856 - -
Gso7g0052 857 Pfam Hsp70 protein 3 697 IPR013126 GO:0005524|GO:0140662
Gso7g0052 857 Gene3D - 5 374 - -
Gso7g0052 857 Gene3D Actin; Chain A, domain 4 230 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0052 Gso-Chr7 451234 456529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0052 4 401 Calmodulin-binding Proteins AT1G16030 36.658 2.04e-83 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0052 K09489 - gmx:100780156 1615.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0052 7 451234 456529 Gso7g0052 7 451234 456529 ECH