Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0046 ATGGATTTCTGGCCAGAATTTCTTGCAAGCAGTTCGGGAAGAGAGTTTGTAGCAGGTGGCTTTGGAGGCATTGCTGGTATAATTTCAGGTTATCCACTTGACACTCTTCGCATCAGATTACAGAACTCGAAAAATGGCTCTGCCTTCACAATCCTTAGACAAATGGTGTCTAGGGAAGGACCTGCTTCTTTGTACCGTGGCATGGGCGCACCATTAGCCTCCGTTACTTTTCAGAATGCGATGGTTTTCCAAACGTACGCAGTTCTGTCAAGGGCATTTGACTCATCTGTTTCTGCTAAAGACCCTCCTTCCTACAAGGGTGTTGCTTTAGGAGGAACTGGTACCGGGGCCATCCAAAGTCTATTAATATCCCCTGTGGAGTTGACCAAAGTTCGACTTCAGCTGCAAAACGCAGGTCAGATGACAGAAACCGCAAAAGGTCCTCTAATGCTCGCTAAGAACATATGGAGAAAAGAAGGCCTTCGAGGAATCTATCGAGGTCTAGGTGTCACTGTGATGAGGGATGGACCTTCTCATGGTTTATACTTCTGGACATATGAATACATGAGGGAACAACTTCACCCAGGTTGCAGAAAAAGTGGTGAAGAGAGTTTGAATACTATGTTAATAGCAGGAGGATTAGCAGGGGTGACGAGTTGGATTAGTTGCTACCCTTTTGATGTTGTAAAGACAAGACTACAGGCTCAAACACCCTCTTCTATAAAGTACAAAGGCATTATAGATTGTTTCAAAAAGAGTGTTAACGAAGAAGGATACGGTGTGCTATGGCGGGGTTTAGGAACTACAGTTGCCAGAGCTTTCCTAGTAAATGGTGCCATATTTTCTGCATATGAGATTTCACTAAGATTACTGTTTAACAATGGGAATATTCAAATGCAGGAAACACTATAG 912 0.4364 MDFWPEFLASSSGREFVAGGFGGIAGIISGYPLDTLRIRLQNSKNGSAFTILRQMVSREGPASLYRGMGAPLASVTFQNAMVFQTYAVLSRAFDSSVSAKDPPSYKGVALGGTGTGAIQSLLISPVELTKVRLQLQNAGQMTETAKGPLMLAKNIWRKEGLRGIYRGLGVTVMRDGPSHGLYFWTYEYMREQLHPGCRKSGEESLNTMLIAGGLAGVTSWISCYPFDVVKTRLQAQTPSSIKYKGIIDCFKKSVNEEGYGVLWRGLGTTVARAFLVNGAIFSAYEISLRLLFNNGNIQMQETL* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0046 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 92 IPR018108 -
Gso7g0046 303 Pfam Mitochondrial carrier protein 110 193 IPR018108 -
Gso7g0046 303 Pfam Mitochondrial carrier protein 12 93 IPR018108 -
Gso7g0046 303 Pfam Mitochondrial carrier protein 207 294 IPR018108 -
Gso7g0046 303 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 293 - -
Gso7g0046 303 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Gso7g0046 303 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Gso7g0046 303 PRINTS Mitochondrial carrier protein signature 118 136 IPR002067 GO:0055085
Gso7g0046 303 PRINTS Mitochondrial carrier protein signature 165 183 IPR002067 GO:0055085
Gso7g0046 303 PRINTS Mitochondrial carrier protein signature 212 234 IPR002067 GO:0055085
Gso7g0046 303 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 293 - -
Gso7g0046 303 SUPERFAMILY Mitochondrial carrier 14 285 IPR023395 -
Gso7g0046 303 Gene3D Mitochondrial carrier domain 12 301 IPR023395 -
Gso7g0046 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 290 IPR018108 -
Gso7g0046 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 192 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0046 Gso-Chr7 404161 407219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0046 1 294 Antiporters AT1G79900 71.186 1.70e-147 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0046 K15109 - gmx:100812056 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0046 7 404161 407219 Gso7g0046 7 404161 407219 ECH