Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0024 ATGAAGGAGAAGAAGAAATACCCCATCGGCTCCGAGCATTACCTTCTATACGAGGAGATTGGACAGGGTGTAAGCGCTTCTGTCCACCGCGCTCTCTGCGTCCCCTTCAACGAGGTCGTCGCCATCAAAATCCTCGACTTCGAACGTGACAATTGCGATCTGAACAACGTTTCTCGTGAGGCCCAGACAATGTTCCTTGTTGACCACCCTAACGTTCTCAAATCACTCTGCTCCTTCGTCAGCGAGCACAATCTGTGGGTGGTGATGCCCTTCATGTCCGGCGGTTCATGCCTCCACATCCTCAAATCCTCCCACCCCGACGGTTTCGTGGAGGTCGTCATTTCTACCATTCTCAAAGAGGTCTTGAAGGCTTTGGAGTACCTTCACCATCACGGCCACATCCACCGCGACGTCAAGGCCGGCAACATTCTCATCGATTCTCGCGGCACCGTCAAGCTCGGCGACTTTGGTGTCTCTGCCTGCCTCTTTGATTCCGGTGACCGCCAACGCACACGTAATACATTTGTCGGAACACCTTGCTGGATGGCACCCGAGGTCATGGAGCAACTTCACGGCTATAATTTCAAAGCTGACATCTGGTCATTTGGTATAACCGCCTTGGAGCTTGCACATGGCCATGCCCCTTTCTCGAAATTTCCACCAATGAAGGTACTTCTCATGACTCTGCAAAATGCACCCCCTGGCCTTGACTACGAGAGGGATAGGAAGTTCAGTAAGTCTTTCAAGCAGATGATTGCTAGTTGCTTGGTAAAAGATCCTTCAAAACGACCCTCTGCAAGCAAGTTGTTGAAGCATTCCTTCTTTAAGCAGGCTCGCTCCAGTGATATTATAGTCAAAAAGCTTTTGGAGGGGTTGCCTGCTTTAGGTGACCGAATGGAAGCTCTAAAGAGAAAAGAAGAAGATATGCTCGCACAGAAGAAAATGCCTGATGGAAAGATGGAGGAATTATCACAGAACGAATACAAACGAGGAATTAGTGGCTGGAACTTCAATCTTGACGACATGAAGGCTCAGGCTTCCTTGATTCACGATTTCGACGATGCTATGTCTGATACCAACCATGCAGGAAGTTCAATTTCTTTATCTACACTTGATTCACAAGATAAGCAATTGCCAAGTGCAATTCACAAACCTTCTCGATCTGCTGATATGGAAGAGAATGACGAGATGCAAAATCTATCAGCTTCTGTTCTCGTAGTTGATTCTGCAGTAAACGATGCCAAATTTAGGTTTGAAAAATCTGACGACCACTCTAGCATCACCTGTTCAAGCCATGAACCACAAACTTCTTCATCCTGTCTCGATGATCATGTGGACAATAATTTGGGTGAAAAACCTGATATGGAAAATGGTGGAAGATCCGTGGAGGGAATGGCTACCCATTATTATCATAGAAGTGGATGTTCATCTAGCATCTTACCTGAAGTTACTCTTCCACCTATTCCACCAGAAAGTGAGAAACTACAAAATCTGCACCCGAACGTTTCAAGTTGCAATGCAACTTCATTTCCACAGACAGGAGAGGACGTGCTTACTGAACTTCCTTCTAGAGTCTCAAAATCATCAGCTAATTCTGATGACACTGATGAGAAATCAAAGGTGCCAGTTGTACAGCAGAGAGGACGTTTTAAGGTTACATCTGAGAATGTTGACCCAGAAAAGGTGGCCCCTCCTCCTGTATTGCAAAAGAGCCATAGTGTGCAGGTTTTTAGCCAGCATAATGCTGCTTCTACACATCCAACTTTGCCATTATTACCAGCATCTGATGCCACACCATCAAATCTTTCTGGCTGCTCTGTGTTTCCTGTGTTGCACTCTGTACTGCAGATAAATATTCTTCAAAGGGAGAGCATTTTAAGTTTAATGAAGCAAATTACTTCCGGCGACTCTTCAGCTGATGGCACATGTAACCCAGCACAGATAGCAATAACTGAGAAATCTTTGCTAGAAGCAGCTCACGAGAGGGAAAAGGAGTTACTTCATGAGATAACAGAGTTGCAGTGGAGGCTTATCTGTACCCAGGAGGAGCTTCAAAAATTGAAAACAGAAAACGCCCAGGTGTGA 2085 0.4585 MKEKKKYPIGSEHYLLYEEIGQGVSASVHRALCVPFNEVVAIKILDFERDNCDLNNVSREAQTMFLVDHPNVLKSLCSFVSEHNLWVVMPFMSGGSCLHILKSSHPDGFVEVVISTILKEVLKALEYLHHHGHIHRDVKAGNILIDSRGTVKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYNFKADIWSFGITALELAHGHAPFSKFPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSASKLLKHSFFKQARSSDIIVKKLLEGLPALGDRMEALKRKEEDMLAQKKMPDGKMEELSQNEYKRGISGWNFNLDDMKAQASLIHDFDDAMSDTNHAGSSISLSTLDSQDKQLPSAIHKPSRSADMEENDEMQNLSASVLVVDSAVNDAKFRFEKSDDHSSITCSSHEPQTSSSCLDDHVDNNLGEKPDMENGGRSVEGMATHYYHRSGCSSSILPEVTLPPIPPESEKLQNLHPNVSSCNATSFPQTGEDVLTELPSRVSKSSANSDDTDEKSKVPVVQQRGRFKVTSENVDPEKVAPPPVLQKSHSVQVFSQHNAASTHPTLPLLPASDATPSNLSGCSVFPVLHSVLQINILQRESILSLMKQITSGDSSADGTCNPAQIAITEKSLLEAAHEREKELLHEITELQWRLICTQEELQKLKTENAQV* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0024 694 MobiDBLite consensus disorder prediction 423 442 - -
Gso7g0024 694 SMART serkin_6 14 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0024 694 Gene3D Phosphorylase Kinase; domain 1 2 91 - -
Gso7g0024 694 MobiDBLite consensus disorder prediction 481 567 - -
Gso7g0024 694 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 3 693 - -
Gso7g0024 694 Pfam Protein kinase domain 17 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0024 694 CDD STKc_OSR1_SPAK 12 275 - -
Gso7g0024 694 Coils Coil 670 694 - -
Gso7g0024 694 MobiDBLite consensus disorder prediction 496 516 - -
Gso7g0024 694 ProSiteProfiles Protein kinase domain profile. 14 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0024 694 MobiDBLite consensus disorder prediction 530 544 - -
Gso7g0024 694 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Gso7g0024 694 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 3 693 - -
Gso7g0024 694 SUPERFAMILY Protein kinase-like (PK-like) 12 276 IPR011009 -
Gso7g0024 694 Gene3D Transferase(Phosphotransferase) domain 1 95 328 - -
Gso7g0024 694 MobiDBLite consensus disorder prediction 428 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0024 Gso-Chr7 228588 235611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0024 3 676 MAP Kinase Kinase Kinase Kinase AT1G79640 63.836 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Gso7g0024 Pkinase 2.2e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0024 K08835 - gmx:100819537 1385.16