Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0013 ATGGATTCAACGAAGTGTAACAAGATCAGAGAAGTTGTTAGGCTTCAACAAATCCTCAAGAAGTGGAAGAAAGTTGCAACTGCTTCCAACAACAACAGCTCCAGCAGCAAAGGCATCAAGTTTTTAAAACGAACCCTTTCATTCACAGACACCAATGACATCGTTCCAAAAGGGTTCCTCGCAGTTTGTGTAGGGAAAGAGCTCAAGAGATTCATTATTCCCACGGATTACTTGAGACACCAAGCATTTGAGATGTTGCTCCAAGAAGCAGAAGAGGAATTTGGTTTCCAGCAAGAGGGTGTGCTCAAAATCCCATGCCAAGTATCAGTCTTTGAGAAAATATTGAAGGCCGTGGAAGACAACAAAGAACCCTTGCACGAGTTTGATTGTGAAGTTACTTCCCCTCATCATGCTCAAACGTGTACATAG 429 0.4266 MDSTKCNKIREVVRLQQILKKWKKVATASNNNSSSSKGIKFLKRTLSFTDTNDIVPKGFLAVCVGKELKRFIIPTDYLRHQAFEMLLQEAEEEFGFQQEGVLKIPCQVSVFEKILKAVEDNKEPLHEFDCEVTSPHHAQTCT* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0013 142 PANTHER OSJNBA0060N03.10 PROTEIN 5 127 - -
Gso7g0013 142 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 127 IPR003676 GO:0009733
Gso7g0013 142 Pfam Auxin responsive protein 20 117 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0013 Gso-Chr7 167635 168109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0013 1 123 Calmodulin-binding Proteins AT2G24400 61.654 9.11e-52 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0013 K14488 - gmx:100818996 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0013 7 167635 168109 Gso7g0013 7 167635 168109 ECH