Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0005 ATGAAGTTAGAAGTGGAGGTAATCTCCAAGGAAATGATCAAACCCTCTTCTCCAACCCAGGACCATCTTCGTCACTATCCACTCTCTTTTCTCGATCAAGTCTCTCCCATGGTGTATAACCCTATGGTTCTCTTTTACTCTTGCTACGGTATCACTCAAACTCAATTCACCATTTCCGAAAAGCTGAAGAAATCTTTGTCTGATGTTTTAACCCATTTCTACCCTCTTGCCGGGCGAGTCAATGGGAACAGTACTTTCATAGACTGCAACGACGAGGGTATCCCCTACTTAGAAGCAAAAGTGAAGTGCAAAGTTGTCGACGTTATTCACAAACCAGTTCCAGGAGAACTCAACCATTTGGTTCCATTTCTACTAGATGATATCACCAATATCACATTTGGTGTTCAGCTTAATGTTTTTGATTGCGGCGGTATTGCAATCGGAGCTTGCCTTTCTCACCAGATTGCAGATGGTCTGTCATTTTTCATGTTCCTCAATTCTTGGGCAGCATTTGCTAGTAGGGGGGAACAAGCTGTGTTGCCAAACCCGCAGTTTATTTCAGCAAAGCTCTTCCCACCGAAAAATATATCTGGATTTGATCCTCGAAGTGGCATCATTAAGGAGAACATCATCTGCAAGATGTTTGTGTTTGATGGGTCTGTTGTTGAAAGTCTTAGAGCAAGATATGCAGCAACAAGCTTTGAAAACGAGAAGCACCCTACCCGAGTAGAGGCTTTATCTGCTTTCATTTGGAGTCGTTATGTGGCTGTGACTGGTCCACAGAGAACATATGCTGTGGTTCACGCAGTGAACCTTCGTCCAAAGATGGAACCACCACTGCCTCCAGATTCCTTTGGCAATTACTACCGAATCTCTTTGACGATTCCCTCGTTGAACACTGAAGAGCACCTAGTGAAACAGGCAAGGGATCAGATAAAGAAGATTGACAAGGATTATGTGAGAAAACTTCAATATGGAAACGACCATTTGGATTTCCTTAAGGATAGCTCATATAGAGTGCTTCTGAAGGGGGAACTAGTCCCATTTAATATTACTAGTTTGTGTAGGTTTCCTCTCTACGACGCTGATTTTGGATGGGGAGAACCAACATGGGTAGGTTCACCTGCTTTAACTTTTAAAAATCTGGTTGTCTTTATAGACACAAAGAATGGCGGTGGCATTGAGGCTTATGTTAGCTTAAAGGTGGAGGACATGACAAAGTTTGAAGCAGATGAGGAGTTACTTGCCTGTGTGAGTAAAGCACGGGTTTGTTGA 1275 0.4298 MKLEVEVISKEMIKPSSPTQDHLRHYPLSFLDQVSPMVYNPMVLFYSCYGITQTQFTISEKLKKSLSDVLTHFYPLAGRVNGNSTFIDCNDEGIPYLEAKVKCKVVDVIHKPVPGELNHLVPFLLDDITNITFGVQLNVFDCGGIAIGACLSHQIADGLSFFMFLNSWAAFASRGEQAVLPNPQFISAKLFPPKNISGFDPRSGIIKENIICKMFVFDGSVVESLRARYAATSFENEKHPTRVEALSAFIWSRYVAVTGPQRTYAVVHAVNLRPKMEPPLPPDSFGNYYRISLTIPSLNTEEHLVKQARDQIKKIDKDYVRKLQYGNDHLDFLKDSSYRVLLKGELVPFNITSLCRFPLYDADFGWGEPTWVGSPALTFKNLVVFIDTKNGGGIEAYVSLKVEDMTKFEADEELLACVSKARVC* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0005 424 PANTHER F21J9.9 2 420 - -
Gso7g0005 424 Pfam Transferase family 4 414 - -
Gso7g0005 424 PANTHER ANTHRANILATE N-BENZOYLTRANSFERASE 2 420 - -
Gso7g0005 424 Gene3D - 1 197 IPR023213 -
Gso7g0005 424 Coils Coil 298 318 - -
Gso7g0005 424 Gene3D - 207 418 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0005 Gso-Chr7 93461 95079 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0005 3 409 Monolignol Biosynthesis Gene Families AT5G48930 26.742 4.75e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0005 K13065 - gmx:102670206 864.374