Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0003 ATGAAACTGCAGGCACATATTCCGGGGGAGATGTCAGGACAGGTACCTAATCAAGCAGGGTCTCAATTGTCTGGTCTGACCCAACTGAATGGGAATGCACTCACTCATCAGATGCCACCTTTAGGGGGTGTACCGCGTTCAACAATTAATATGGATCCTGAATTTCTTAGAGCTCGCACTTTTATTCAAGAGAAGATCTTTGATATGTTGTTGCAACGACAACAGCTGCCAGTTACAGATGTACAGAGAAGGAAGCTTAAGGATCTTGCAAACCGCTTGGAGGAGGGCATGTTAAAAGCTGCTCTCTCTAAGGAGGATTACATGAACTTGGATACACTGGAGAGTCGTTTATCTAATTTCCTCCGACGAGCATCTATGAATAATCACAACCAACAATATCCGCAGCGTGTTAACTCTTCTCCAATTGGTACAATGATACCAACCCCTGGTATGTCACATGTTCCAAATTCAAGCATGATGGTTGCATCTTCTATGGATGCCTCTGTGATTTCTGCCAGTGGGCGTAATAGCATAGCATCAACATCTTTCAATAGTGTAAACATGTTACCAGCTGGTGGTATGCTTGGCAGTACCTTAAATAGATTTGATGGTTTGTCTAATGGCTATCAGCAGTCTTCTACCAGCTTTTCTGCTGCCTCAGGGGGGAACATTTCATCAATGGGGGTGCAGAGAATTGCTAGCCAGATGATTCCCACTCCTGGATTCACAGTCAGCAGTAATCACTCACACATGAATATAGATTCTAATAATACTAATGGTGGTGCCTTTTCCAGTGTAGAGTCTACTATGGTACCACTGTCACAGCTACAGCAGCAGAAGCAGCATGTTGGTGGCCAAAATAGTCATGTATTGCAGAACCTCAGTGGCCAAATGGGTAGTGGAATGAGATCTGGTTTACTACAGAAGCCATTTGCAAACTCAAATGGTGCTATAAGTAGTGGATCAGGCTTGATTGGAAATAATATACAGCTTACAAATGAACCTGGCACTTCTTCTGACAGCTATGCCTCAACTTATGCTAATTCCCCTAAACACTTGCAGCAGCCCTTCGATCAAAAACAGAAACCAGTAGTGCAGGGTGATGGATATGGAATGAATAATGTTGACAATTTTGCTTCTGGAAACTTTTATACATCTGCGACATCCTCTGGGTCTATGATGAACAATCAGAACACTAATTCAGTTAAATTACCATCAATGCCCAAAATTAGCTCATTGATGAATAGTCACTCAAATTTGCACGGTATGCAGCAGGCTGCTCATATAAAGTCCCAACCAACTAACCAGCTAGATAAGTTGAATTTTCAGTCTTCATTGACTTCAAGAGATGGCCTTCTGCATTCTCAACAGCAGTATCAGCAAAGGCCTCAACAATTGCAGCAGCCAGATCAGTATGCACAACAGCAATTTCAATCTATGCAAAGTCAACAGCCTCCACATGTGATCAACAGTGACACATTCAGTCAGTCTCTGCTATCTTCCAATCTAGAAAACCGAGTGAAGCCTGAACCTGGAATTGAACATCATAAAGAAGTGCCTAATTCTCATGTCTCTGAACAGTTTCACATATCTGAGATGCAGAGTCAGTTCCATCAGAACTCATCTGAAGATTGCTCTAGGGGTGCTCAATATCTTCCATTCCCATCTGGTCACCATGATTTATTGTCATCAACACCTCAAATTTCACAACAAATGTTGCACCAGCATCAATTGGTTGCAGAGTCTCAAAATAATTTCAACAAATCTGTAATTCTAAACCAATGGCCTCAATCACAAGATTGTAACCACATACCTGACAGTATTTCACATGATCAACATCTCCACATGGATTTTCATCAAAGAATATCTGGGCAAGATGAAGCTCAATGCAATAATTTATCGTCAGATGGATCTATTATTGGTCGAGCTGTTCTTTCTAGAGGCTCAGCTGAGCAACTGGACTCTGGAAATGCTATAAAAAAGGCGCACAGGAATCAACAGAGGTGGCTTTTATTTCTACTTCATGCACGACGGTGTTCTGCCCCTGAAGGACGATGCAAAGAACGCTTTTGTTCTAATGCACAGAAGTTATGCAAGCACTTAGATAGATGCACCCTGCGCCATTGCCAATATCCTCGTTGCCATCATACCAGGGTGTTGCTTCATCATTTCATAAACTGCAAGGATCCATGTTGCCCTGTTTGTGTTTTTGTGAGAAAGTATCGACGTGCATTTCAACTCAAGCCTCAGATTCAGCCGGAACCTGAATCCAGCTTGCCAACTGCAGTGAATGGATCCTGTAAACCTTACAATATTGTAGGCACATCGCCTAGATTGATCTCGAAGCCTCCATTAGTTGTTGAAACTTCCGAGGACTTGCACCCATCTATAAAACGTATAAAGATTGAGCATTGTGCCCAGCCTATTAATCCTGAAAATGACCATTCTGCTTCATCTTTTACAGAAAATTGTGAATCTGTTGTTTCCAGGGATGCTCAGTCTCAACCCCAAGCTTATCCCAATATTGAGAAGTCTATCTCAATCGAATCTGAGCTTACAGAAGTTAAGGCTGAAGCTCCTGCACATGTGGTACATGAAAAATTAAGTGAGATGAAAATGGATAACAATAATGCAGATGATAAAATGCCTATTGCTGAACCTGTCAAATATGATGAACCTGCTAATTTAGCTAGGCCTGAAAATATAAAAACTGAGAAAGAAACTGGACAAGACAGGAAAGAAAATGTTGTGCAGACATCTGAAAATGCAGCTGGAACCAAGTCTGGCAAGCCAAAAATAAAAGGAGTCTCATTAACTGAATTATTTACTCCAGAGCAAGTCAGGGAACATATCACTGGCCTCAGGCAATGGGTTGGCCAGAGCAAGTCAAAAGCAGAGAAGAATCAAGCAATGGAGCATTCAATGAGTGAGAACTCCTGCCAATTGTGTGCTGTAGAGAAGCTTACCTTTGAACCACCGCCTATTTATTGCACAACTTGTGGGGTTCGCATTAAACGAAATAATATGTATTATACCACGGGCACCGGTGACACACGGCATTATTTTTGTCTTCCATGCTATAATGATGCTCGTACAGAGAACATCATTGTTGATGGGACTCCCATTGCCAAATCAAGATTGGAAAAGAAGAAGAATGATGAGGAAACTGAGGAATGGTGGGTTCAATGTGATAAATGTGAAGCATGGCAACATCAAATTTGTGCTTTATTTAATGGCAGAAGAAATGATGGTGGACAAGCTGAATATACTTGCCCTAACTGCTATATTCAAGAGGTAGAAAGAGGAGAGCGCAAGCCCTTACCGCAAAGTGCTGTTCTTGGAGCCAAGGATTTGCCGAGAACTATTCTCAGTGATCACATAGAACAGCGATTATTTAAACGGCTAAAGCAAGAAAGACAAGAAAGGGCAAGGCTTCAAGGAAAAAGTTATGATGAGATTCCTGGAGCTGAAGCTCTTGTTATAAGAGTTGTGTCATCTGTTGACAAAAAGTTAGAAGTGAAACCGCGGTTTCTGGAGATTTTTCAGGAAGAGAATTACCCAACAGAATTTCCATATAAATCAAAGGTAGTTTTGTTGTTTCAAAGGATAGAAGGTGTGGAAGTTTGCCTATTTGGCATGTATGTTCAAGAATTTGGATCTGAATGTCAATTTCCTAATCAGCGCCGCGTGTACCTTTCATATTTGGATTCTGTGAAGTATTTTAGGCCTGAGGTTAAAGCAGTGACGGGAGAGGCTCTTCGGACTTTTGTTTACCATGAAATTCTGATTGGATATCTTGAATATTGCAAGAAACGTGGTTTTACAAGCTGCTATATCTGGGCTTGTCCTCCATTAAAGGGGGAAGATTATATTTTATATTGCCATCCAGAAATTCAGAAAACCCCAAAATCCGATAAGCTACGTGAATGGTATCTGGCCATGTTAAGAAAAGCTGCGAAGGAGAATATTGTGGTCGACCTCACCAACTTATACGATCATTTCTTTGTATCTACTGGTGAATGTAGGGCTAAGGTTACTGCCGCAAGACTCCCGTATTTTGATGGTGACTACTGGCCTGGGGCTGCAGAGGATTTGATTTATCAGCTTCGCCAAGAGGAAGATGGAAGGAAACAAAATAAAAAGGGAACAACTAAAAAGACTATAACAAAAAGGGCTTTGAAAGCGTCTGGTCAGTCAGATCTTTCAGCAAATGCCTCAAAGGACCTGCTCCTTATGCACAAACTTGGTGAAACCATTTGCCCGATGAAGGAAGATTTTATTATGGTTCATTTGCAGCATGCATGTACTAGCTGTTGTATTTTAATGGTGTCTGGCAACCGTTGGGTTTGCAACCAGTGCAAGAATTTTCAGATTTGTGATAGGTGTTACGAAGCAGAACTAAAGCGTGAAGAGAGAGAAAGACATCCTATTAACCAGAGGGAGAAACATACTCTTTATCCTGTTGAAATTACTGATGTTCCTTCTGATACAAAGGACAAAGATGATATTCTTGAGAGCGAATTCTTTGACACTAGACAGGCATTTCTGAGTCTCTGCCAGGGAAATCATTACCAGTATGATACACTAAGACGGGCCAAGCATTCCTCAATGATGGTTCTCTATCATCTTCATAATCCAACAGCTCCAGCATTTGTGACAACTTGCAATATATGTTATCTTGACATAGAAACTGGTCAAGGATGGCGCTGTGAGGTTTGCCCTGAGTATGATGTATGCAATGCTTGTTATCAAAAGGATGGAGGTATTGATCATCCTCATAAGTTGACAAATCATCCATCCATGGTGGATCGTGATGCTCAGAACAAAGAAGCAAGGCAGCATCGAGTATCGCAGCTACGGAAAATGCTTGATCTCCTTGTTCATGCATCCCAATGTCGTTCTGCACATTGCCAATATCCCAATTGTCGCAAGGTGAAGGGACTTTTCCGCCATGGAATGCACTGCAAAACACGAGCTTCTGGAGGTTGTGTTCTTTGCAAGAAAATGTGGTATTTGCTTCAACTTCATGCTCGTGCTTGCAAAGAATCTGAATGCCATGTACCACGTTGCAGAGATTTAAAAGAACATCTAAGGAGACTTCAGCAACAGTCTGATTCACGGCGTAGAGCTGCTGTAATGGAAATGATGAGGCAGAGAGCCGCAGAAGTTGCTAACAATGCTGGATGA 5187 0.4166 MKLQAHIPGEMSGQVPNQAGSQLSGLTQLNGNALTHQMPPLGGVPRSTINMDPEFLRARTFIQEKIFDMLLQRQQLPVTDVQRRKLKDLANRLEEGMLKAALSKEDYMNLDTLESRLSNFLRRASMNNHNQQYPQRVNSSPIGTMIPTPGMSHVPNSSMMVASSMDASVISASGRNSIASTSFNSVNMLPAGGMLGSTLNRFDGLSNGYQQSSTSFSAASGGNISSMGVQRIASQMIPTPGFTVSSNHSHMNIDSNNTNGGAFSSVESTMVPLSQLQQQKQHVGGQNSHVLQNLSGQMGSGMRSGLLQKPFANSNGAISSGSGLIGNNIQLTNEPGTSSDSYASTYANSPKHLQQPFDQKQKPVVQGDGYGMNNVDNFASGNFYTSATSSGSMMNNQNTNSVKLPSMPKISSLMNSHSNLHGMQQAAHIKSQPTNQLDKLNFQSSLTSRDGLLHSQQQYQQRPQQLQQPDQYAQQQFQSMQSQQPPHVINSDTFSQSLLSSNLENRVKPEPGIEHHKEVPNSHVSEQFHISEMQSQFHQNSSEDCSRGAQYLPFPSGHHDLLSSTPQISQQMLHQHQLVAESQNNFNKSVILNQWPQSQDCNHIPDSISHDQHLHMDFHQRISGQDEAQCNNLSSDGSIIGRAVLSRGSAEQLDSGNAIKKAHRNQQRWLLFLLHARRCSAPEGRCKERFCSNAQKLCKHLDRCTLRHCQYPRCHHTRVLLHHFINCKDPCCPVCVFVRKYRRAFQLKPQIQPEPESSLPTAVNGSCKPYNIVGTSPRLISKPPLVVETSEDLHPSIKRIKIEHCAQPINPENDHSASSFTENCESVVSRDAQSQPQAYPNIEKSISIESELTEVKAEAPAHVVHEKLSEMKMDNNNADDKMPIAEPVKYDEPANLARPENIKTEKETGQDRKENVVQTSENAAGTKSGKPKIKGVSLTELFTPEQVREHITGLRQWVGQSKSKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTTCGVRIKRNNMYYTTGTGDTRHYFCLPCYNDARTENIIVDGTPIAKSRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVERGERKPLPQSAVLGAKDLPRTILSDHIEQRLFKRLKQERQERARLQGKSYDEIPGAEALVIRVVSSVDKKLEVKPRFLEIFQEENYPTEFPYKSKVVLLFQRIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLAMLRKAAKENIVVDLTNLYDHFFVSTGECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQSDLSANASKDLLLMHKLGETICPMKEDFIMVHLQHACTSCCILMVSGNRWVCNQCKNFQICDRCYEAELKREERERHPINQREKHTLYPVEITDVPSDTKDKDDILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICYLDIETGQGWRCEVCPEYDVCNACYQKDGGIDHPHKLTNHPSMVDRDAQNKEARQHRVSQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMHCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG* 1729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0003 1728 ProSiteProfiles Zinc finger TAZ-type profile. 657 738 IPR000197 -
Gso7g0003 1728 PANTHER ZINC FINGER, TAZ-TYPE-RELATED 213 1727 - -
Gso7g0003 1728 Gene3D TAZ domain 1607 1724 IPR035898 -
Gso7g0003 1728 SMART TAZ_2 1613 1691 IPR000197 -
Gso7g0003 1728 SMART TAZ_2 660 738 IPR000197 -
Gso7g0003 1728 SUPERFAMILY TAZ domain 1612 1695 IPR035898 -
Gso7g0003 1728 ProSitePatterns Zinc finger ZZ-type signature. 1555 1582 IPR000433 GO:0008270
Gso7g0003 1728 ProSiteProfiles Zinc finger ZZ-type profile. 1430 1493 IPR000433 GO:0008270
Gso7g0003 1728 Gene3D - 1549 1603 IPR043145 -
Gso7g0003 1728 MobiDBLite consensus disorder prediction 336 358 - -
Gso7g0003 1728 SUPERFAMILY RING/U-box 1410 1484 - -
Gso7g0003 1728 ProSitePatterns Zinc finger PHD-type signature. 1023 1094 IPR019786 -
Gso7g0003 1728 SUPERFAMILY TAZ domain 662 742 IPR035898 -
Gso7g0003 1728 MobiDBLite consensus disorder prediction 901 931 - -
Gso7g0003 1728 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1047 1095 IPR013083 -
Gso7g0003 1728 Pfam Zinc finger, ZZ type 1552 1591 IPR000433 GO:0008270
Gso7g0003 1728 SUPERFAMILY FYVE/PHD zinc finger 1056 1096 IPR011011 -
Gso7g0003 1728 Coils Coil 1128 1148 - -
Gso7g0003 1728 PANTHER CBP/P300-RELATED 213 1727 IPR013178 GO:0004402|GO:0006355|GO:0016573
Gso7g0003 1728 SUPERFAMILY RING/U-box 1531 1599 - -
Gso7g0003 1728 SMART zz_5 1549 1595 IPR000433 GO:0008270
Gso7g0003 1728 SMART zz_5 1429 1473 IPR000433 GO:0008270
Gso7g0003 1728 CDD PHD_HAC_like 1022 1094 - -
Gso7g0003 1728 Pfam PHD-finger 1053 1095 IPR019787 -
Gso7g0003 1728 MobiDBLite consensus disorder prediction 455 491 - -
Gso7g0003 1728 Pfam Histone acetylation protein 1152 1374 IPR013178 GO:0004402|GO:0006355|GO:0016573
Gso7g0003 1728 ProSiteProfiles Zinc finger ZZ-type profile. 1550 1603 IPR000433 GO:0008270
Gso7g0003 1728 Gene3D TAZ domain 654 743 IPR035898 -
Gso7g0003 1728 Pfam TAZ zinc finger 667 735 IPR000197 -
Gso7g0003 1728 Pfam TAZ zinc finger 1620 1690 IPR000197 -
Gso7g0003 1728 ProSiteProfiles Zinc finger TAZ-type profile. 1609 1693 IPR000197 -
Gso7g0003 1728 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1112 1548 IPR031162 GO:0004402
Gso7g0003 1728 Gene3D - 1426 1485 IPR043145 -
Gso7g0003 1728 SMART KAT11_2 1145 1442 IPR013178 GO:0004402|GO:0006355|GO:0016573
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0003 Gso-Chr7 45032 61356 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Gso7g0003 HAT_KAT11 1.6e-32 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0003 K04498 - gmx:100809207 3449.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0003 7 45032 61356 Gso7g0003 7 45032 61356 ECH