Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2665 ATGGAATCCCAATTAGTTGATGGTAATGATGATATGGGAGTTTCTGGGGATGTGGGTTTGAGTACGTATGAAGTTCAGATGCATCAAGAAACATATGAAGTGGATCCAAATGAGGAGTGTAGAGTACTAGAGAGTTCTTCTGGGGGAGAGGTGGGTATCTGCGATGATCATGCTATTCAGGAACCATATGAAGGCATGGAATTTGAATCTGAAGATGCTGCTAAGATATTCTATGATGAATATGCCCGGCGTTTAGGATTTGTTATGCGTGTGATGTCTTGTCGACGCTCAGAAAGGGATGGTAGGATTCTTGCCCGCAGACTTGGATGTAATAAAGAGGGTTATTGTGTCAGCATCCGAGGGAAATTTGCATCAGTTCGTAAACCTAGGGCCAGCACAAGGGAAGGTTGTAAGGCAATGATTCATATCAAATATAATAAGTCTGGAAAATGGGTGATAACAAAGTTTGTGAAGGATCATAATCATCCATTAGTAGTCTCTCCACGTGAAGCACGCCAAACAATGGATGAAAAGGATAAGAAAATTCAGGAATTAACAGCAGAGCTTCGGCATAAAAAACGGTTGTGTGCAACATATCAAGAACAGTTGACTTCTTTTATGAAAATTGTTGAAGAGCACAATGAAAAGCTATCTGCCAAAATTCATCATGTAGTTAATAATCTTAAAGAATTTGAATCCATAGAAGAGCTTTTGCACCAGACATAG 726 0.3967 MESQLVDGNDDMGVSGDVGLSTYEVQMHQETYEVDPNEECRVLESSSGGEVGICDDHAIQEPYEGMEFESEDAAKIFYDEYARRLGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFASVRKPRASTREGCKAMIHIKYNKSGKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQELTAELRHKKRLCATYQEQLTSFMKIVEEHNEKLSAKIHHVVNNLKEFESIEELLHQT* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2665 241 Coils Coil 175 202 - -
Gso6g2665 241 Pfam FAR1 DNA-binding domain 77 165 IPR004330 -
Gso6g2665 241 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 29 240 - -
Gso6g2665 241 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 29 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2665 Gso-Chr6 48413489 48417596 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gso6g2665 FAR1 1.1e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2665 - - gmx:100793266 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0938 4 11410040 11416636 Gso6g2665 6 48413489 48417596 GST