Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2659 ATGCATCTATCAAATATGGATACCTCTGGTAATACATGTGAGATAGTGGAATCAAGGGAAGAGATAATTTCCGAGTTCAAAATGGATGAAAAGCCTGAGAGTAGTTGTGCTCACAAATCAGGAAAGAAGTATTCAATTGAGGATGATATTAATCAGCTTTTCCAGGCTATTGAAATTAAAAGCTCATCTAGAAGTCGTAGTTCATCAAGTTTACAAAAGAGTGCTCTTAAAAGGCCAATAAAAGTCACTTCATCTCAGGCATCAGGAATTGGCATCTCAGAGCCTGTAAGTTTAAAGCAGGCACTTAGAGGGTTGTGCATCTCTCAGGCCTCAGAAATGGCTGCTTTGAAGAGACTGACTAAGCCATGCAGTTCATCTAGAGTATCAGAGGCGGGCACCATCAAAAGGTTGTACACAGCAGTGGTAGACGAGGGGAAAGGGAACTTGGTTGAAATCTCTCTAGTACCAGAGATATCTGCACCTTCTGATAAATTGTCTGGTGTAACTATATCAAGTTCAATTGATAATCATTCTAGTCCTTTGGTTGATGCAACAAAACCAAAAGAAATAAAAACTGGGTTTTCATCCCAAGATCGGATTGTTTCTCCACCATTAGAGGTTGAGGGTGAGAAACCAATCATGGGGATTGGAAAACCAATACTTGCAAATTTGTCACCAGTTGCCTCTGCAAGTGAAGAAGTGCCAGAGGTCAGAATGGATCCTGCTTCCTCAAGCAAAGCTTCTCTTGGTTCTTCAATGTCAGATAAGGGGCATGAAGCAAATTTACCTTCTGGATCTTGTCCACCTAGCTCTAGCACTGGAAATGGAGCAGACAAATACACAAGCAGTAATACATGTTTGTCAAAGCCAATATTTAATAACTTGAACTTCCTTAAGAAAAAAGTAAAGCAAGATTTAAGTTCTGCCGCGAGTTGCTCTACTCCATGTACTAGTAATTTGGACAAGGAGGGTGGCAATTCTGATTTTAAGCATGAAATGAAAGATAATGCGAAACAGTCTCCTTGCAGTTCAAATCATAGCATTGAAGTTAACTCAATTAATGGTGGCACAGATTCAAGCAAATCTGGTTTCAGCTTGAATTGCAATAAGAGAACTAAGTTTTTGGTGACAAAAGTTGATGAGAAATCAAGATCAAAGGAAAAGGGTGAGTACTCTCAAAGCTCAAAAAGTAGCATTGGTGAATATAGTAGTAGCACAAGCATCAGCGAGGAAAGCAGTCTAAGTAGTTCCAGTCGCGGTGGCCACAGGCCTCACATGTCAAAACACTTGAGATGGGAAGCTGTTCGTGCTGTTCAGCAGCAACATGGTAATTTAAATTTGAAGCACTTTAAGCTTCTAAGGAGGCTTGGTAGTGGGGACATTGGAACTGTTTATCTTGCAGAACTAATTGGTACAAGCTGCCTTTTTGCACTCAAAGTGATGGACAATGAATTTTTGGCAAGTCGGAAGAAAATGTTCAGGTCCCAAACTGAAAGAGAGATCCTTCAGATGCTGGACCATCCATTTCTTCCTACGCTGTATTCCCATATTGCATCAGATAAGCTCTCTTGCTTGGTTATGGAGTATTGTCCAGGCGGAGATCTGCACGTGCTGCGACAGAGGCAATCATACAAGAGTTTCTCGGAACAAGCGGCTAGGTTTTATGTTGCTGAGGTTCTTCTTGCCCTGGAGTATTTGCACATGCTGGGAGTTGTATATCGTGACCTAAAGCCAGAAAATATCCTGGTACGAGAAGATGGACACATTATGCTGACAGATTTTGACTTGTCACTCAGGTGTTCTGTCAATCCAATGTTAGTCAAGTCATCTTCACCTGACACAGATGCTACAAAGAAGACGTCCAGTCCCTGTTCTGAGGCTAGTTGCATACACCCTTTCTGTCTCCAACCGGATTGGCAAGTTTCCTGCTTTACTCCCATTCTGTTATCTGCCGGAGCAAAATCTCGGAAGATGAAGGCTGACATAGCTTCTCAGGCTGGTCCTCTGCCACAGCTTGTAGTGGAGCCTACCAGTGCACGGTCTAACTCCTTTGTTGGAACCTATGAATATCTTGCTCCGGAGATCATCAAAGGTGAGGGTCATGGGAGTGCAGTAGATTGGTGGACTTTTGGTATATTTTTGTTTGAGCTTTTATATGGTAAGACTCCTTTCAAGGGCCAATCAAATGAGGACACATTAGCCAATGTGGTTTCACAAAGCCTTAAGTTCCCGGGTACTCCAATAGTCAGTTTTCATGCAAGAGATTTGATCAGAGGATTGTTGATAAAGGATCCTGAAAATCGATTAGGTTCTGTAAAAGGTGCTGCTGAAATAAAGCAGCACCCTTTCTTTGAAGGCCTGAACTGGGCTCTAATACGGTGTGCAGCACCGCCAGAGCTCCCCAAGTTTCTGGATTTTGGAAGTAGTGCTCCATCTGTGGCTGCAAATAAGGAGAATGCAAATGATTTAGAGGATATAGAAGATTGTGAAGAGTTTGAGCTGTTTTAG 2508 0.4219 MHLSNMDTSGNTCEIVESREEIISEFKMDEKPESSCAHKSGKKYSIEDDINQLFQAIEIKSSSRSRSSSSLQKSALKRPIKVTSSQASGIGISEPVSLKQALRGLCISQASEMAALKRLTKPCSSSRVSEAGTIKRLYTAVVDEGKGNLVEISLVPEISAPSDKLSGVTISSSIDNHSSPLVDATKPKEIKTGFSSQDRIVSPPLEVEGEKPIMGIGKPILANLSPVASASEEVPEVRMDPASSSKASLGSSMSDKGHEANLPSGSCPPSSSTGNGADKYTSSNTCLSKPIFNNLNFLKKKVKQDLSSAASCSTPCTSNLDKEGGNSDFKHEMKDNAKQSPCSSNHSIEVNSINGGTDSSKSGFSLNCNKRTKFLVTKVDEKSRSKEKGEYSQSSKSSIGEYSSSTSISEESSLSSSSRGGHRPHMSKHLRWEAVRAVQQQHGNLNLKHFKLLRRLGSGDIGTVYLAELIGTSCLFALKVMDNEFLASRKKMFRSQTEREILQMLDHPFLPTLYSHIASDKLSCLVMEYCPGGDLHVLRQRQSYKSFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVNPMLVKSSSPDTDATKKTSSPCSEASCIHPFCLQPDWQVSCFTPILLSAGAKSRKMKADIASQAGPLPQLVVEPTSARSNSFVGTYEYLAPEIIKGEGHGSAVDWWTFGIFLFELLYGKTPFKGQSNEDTLANVVSQSLKFPGTPIVSFHARDLIRGLLIKDPENRLGSVKGAAEIKQHPFFEGLNWALIRCAAPPELPKFLDFGSSAPSVAANKENANDLEDIEDCEEFELF* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2659 835 MobiDBLite consensus disorder prediction 244 280 - -
Gso6g2659 835 Gene3D Transferase(Phosphotransferase) domain 1 678 798 - -
Gso6g2659 835 MobiDBLite consensus disorder prediction 232 280 - -
Gso6g2659 835 MobiDBLite consensus disorder prediction 379 427 - -
Gso6g2659 835 PANTHER FLIPPASE KINASE 1-RELATED 6 835 - -
Gso6g2659 835 CDD STKc_phototropin_like 448 807 - -
Gso6g2659 835 MobiDBLite consensus disorder prediction 338 356 - -
Gso6g2659 835 Gene3D Phosphorylase Kinase; domain 1 448 529 - -
Gso6g2659 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 571 583 IPR008271 GO:0004672|GO:0006468
Gso6g2659 835 MobiDBLite consensus disorder prediction 310 356 - -
Gso6g2659 835 Gene3D Transferase(Phosphotransferase) domain 1 530 599 - -
Gso6g2659 835 SMART serkin_6 450 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g2659 835 MobiDBLite consensus disorder prediction 392 421 - -
Gso6g2659 835 ProSiteProfiles Protein kinase domain profile. 450 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g2659 835 SUPERFAMILY Protein kinase-like (PK-like) 425 803 IPR011009 -
Gso6g2659 835 Pfam Protein kinase domain 681 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g2659 835 Pfam Protein kinase domain 451 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g2659 835 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL1 ISOFORM X1 6 835 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2659 Gso-Chr6 48365432 48370524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2659 331 835 AGC Kinase Gene Family AT3G52890 62.209 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gso6g2659 Pkinase 1.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2659 - - gmx:100784955 1531.15