Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2627 ATGGCAAGAATATCAAATTGGTCTCTTGTCTTCCTCCTCATCTCTACACTACTCCACATAGAGCCCAGCCTCTCAAGCCCAAGCCCAAGCCCAAGCCCAAGCCCGTTCATAAAATCCTCCTGCAGCAGCACCCAGTACCCAGCCCTCTGCGTCTCATCCCTCTCCGTCTACGCCTCCAGCATCCAACAGGACCCTCACCAACTGGTTCAGACAGCACTCTCCCTCTCCCTGAACCGCACCCAAGCCACCAAAACCTTCGTGGCTAACTGCAACAAATTCAGAGGCCTGAAACCCAGAGAGCACGCTGCACTCAAGGACTGCGCCGAGGAAATCAGCGACAGCGTTGACCGCCTCAGCCGGTCGCTGAAGGAGCTCAAGCTATGTAAGGTTAAGGGTGAGGACTTCACGTGGCACATTAGCAACGTGGAGACATGGGTCAGTTCTGCTTTGACCGATGAGAGCACTTGCGGCGATGGATTCTCCGGGAAGGCGCTGAATGGGAAGATCAAGGACTCTATTAGGGCTAGGATGCTCAATGTTGCTCAGGTTACTAGCAATGCTCTCTCGCTTATTAACCACTATGCTGCACAACACTAG 597 0.5377 MARISNWSLVFLLISTLLHIEPSLSSPSPSPSPSPFIKSSCSSTQYPALCVSSLSVYASSIQQDPHQLVQTALSLSLNRTQATKTFVANCNKFRGLKPREHAALKDCAEEISDSVDRLSRSLKELKLCKVKGEDFTWHISNVETWVSSALTDESTCGDGFSGKALNGKIKDSIRARMLNVAQVTSNALSLINHYAAQH* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2627 198 Pfam Plant invertase/pectin methylesterase inhibitor 36 190 IPR006501 GO:0004857
Gso6g2627 198 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 194 IPR006501 GO:0004857
Gso6g2627 198 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 194 IPR035513 -
Gso6g2627 198 PANTHER PECTINESTERASE INHIBITOR-LIKE 15 198 - -
Gso6g2627 198 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 194 IPR035513 -
Gso6g2627 198 CDD PMEI-like_3 39 196 - -
Gso6g2627 198 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 15 198 - -
Gso6g2627 198 SMART PMEI_2 32 190 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2627 Gso-Chr6 48094270 48095132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2627 30 193 Carbohydrate Esterase AT3G14310 30.909 2.35e-22 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2627 - - gmx:100527116 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0980 4 13255537 13256476 Gso6g2627 6 48094270 48095132 GST