Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2626 ATGGAAACCAATTACACTTTGAAGCTAGCTTCCTACAAAGTTCTCACAATTGTTGCATTCATCCTTCTAGCCATCTCTAACATCATTTCAGCTTGTGACAATTCTACCATCCCCACAAATTCCACCCAAACCAAGAATGATTACGCTGCCACCAATTACCGAAACAAAACCATTATTCCATCCAAATCCAATTACACTCAAACCTTCAAAAACTACATTAAAACCTCTTGCAATTTCACCACATATCCATCAATATGCTACAAAACTCTATCCCCCTATGCTACAAAAATTGAAGCAGATCCTCTCAAGCTATGCAATGTGTCTCTCTCCCTAGCTTTAAAGGCAGCCAAGAGTGCATCCTCCGCCATATCAAAGATTCTGAAGAAAAACAATTTGACAGAAATTGCAGAACAAGTGGTGCAAGATTGTTTTGGCAATGTGAAGGATTCCATTGGTGAACTCAAAGATTCCCTTGATGCCATGGGGGATTTGGGTGGTGTTGATAGAAAGTTTCAGATTAGCAACGTACAGACATGGGTGAGTGCCTCTATTACCAATGATCAAACTTGCTCAGATGGGTTTGATGAGATGAACGTGGATTCCACTTTGACGGACAAAATGAGAAAGATTGTTTTGGATGTGGCAAGGAAGACTAGCAATGCTTTGTATTTCATCAACAACAATGCATACTAA 693 0.3968 METNYTLKLASYKVLTIVAFILLAISNIISACDNSTIPTNSTQTKNDYAATNYRNKTIIPSKSNYTQTFKNYIKTSCNFTTYPSICYKTLSPYATKIEADPLKLCNVSLSLALKAAKSASSAISKILKKNNLTEIAEQVVQDCFGNVKDSIGELKDSLDAMGDLGGVDRKFQISNVQTWVSASITNDQTCSDGFDEMNVDSTLTDKMRKIVLDVARKTSNALYFINNNAY* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2626 230 Gene3D Invertase/pectin methylesterase inhibitor family protein 68 228 IPR035513 -
Gso6g2626 230 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 228 - -
Gso6g2626 230 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 70 227 IPR035513 -
Gso6g2626 230 Pfam Plant invertase/pectin methylesterase inhibitor 72 222 IPR006501 GO:0004857
Gso6g2626 230 PANTHER PECTINESTERASE INHIBITOR 4 8 228 - -
Gso6g2626 230 CDD PMEI-like_3 75 227 - -
Gso6g2626 230 TIGRFAM PME_inhib: pectinesterase inhibitor domain 63 227 IPR006501 GO:0004857
Gso6g2626 230 SMART PMEI_2 68 224 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2626 Gso-Chr6 48081065 48081956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2626 73 227 Carbohydrate Esterase AT1G53830 26.875 4.14e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2626 - - gmx:100527823 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0981 4 13335099 13336078 Gso6g2626 6 48081065 48081956 GST