Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2623 ATGAATAATTTTTCCCATGTTCCCCCTGGTTTTAGATTCCACCCTACTGACGAAGAACTTGTTGATTACTACCTAAGGAAGAAAGTTACCTCAAGAGGGATTGACCTCGATGTCATAAAAGATGTTGACCTCTATAAAATTGAGCCATGGGACCTTCAAGAGCTTTGCAGAATAGGAGCACAAGAGCAAAATGAATGGTACTTCTTTAGCCATAAAGATAAGAAGTATCCAACTGGAACTCGCACAAATAGAGCAACAGCAGCAGGGTTTTGGAAGGCAACTGGAAGAGACAAAGCAATCTACTCAAAGCATGACTTGATAGGGATGAGGAAAACCTTAGTCTTTTATAAAGGTCGAGCCCCAAATGGACAAAAATCAGATTGGATCATGCACGAGTATCGACTTGAAACAGATGAAAATGGCGCACCACAGGAAGAAGGATGGGTTGTGTGTAGAGTATTCAAAAAGAGACTAACAACCATGCGTAAACTGAGTGAGCATGATTCTCCCTGTTGGTATGATGACCAAGTCTCTTTCATGCAAGACTTGGACTCACCAAAGCAAAGCTCTCAACCTAATTTGCCCTACCAGCAGTTCCAATATTCTTGCAAGAAAGAGTTGGATTTGTCATACCATTTACCTGTCCAGCTTCCATTGGAGAACCAAAAATTGCTCCAATCTGCCTCCAACTCAATGACACCATATGGTATAGAAGAAAACCCTAATGCCATGCAGCCAGCATCATCAATGATGCAACAAGTTCAACAACAAAATTTTCAGGCTGTAGTGTTTGGAAACAATGCCAATGATCAACAAGTGACTGATTGGAGATCTCTTGACAAGTATGTTGCTTCACAACTTAGTCAAGAAGATGCATCCAAAGATCACAATAGATACTCAAACACAGGCAACATTTTTCAAGTGAAGAACAATAGCAATATTGAACAGTTGAGGGACTTGGACAAGGATGAAATGATGCCTGAAAATGCCTCAACATCGAACTCAAGCTGTCCAATTAACATGTGGAAATAG 1032 0.406 MNNFSHVPPGFRFHPTDEELVDYYLRKKVTSRGIDLDVIKDVDLYKIEPWDLQELCRIGAQEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGAPQEEGWVVCRVFKKRLTTMRKLSEHDSPCWYDDQVSFMQDLDSPKQSSQPNLPYQQFQYSCKKELDLSYHLPVQLPLENQKLLQSASNSMTPYGIEENPNAMQPASSMMQQVQQQNFQAVVFGNNANDQQVTDWRSLDKYVASQLSQEDASKDHNRYSNTGNIFQVKNNSNIEQLRDLDKDEMMPENASTSNSSCPINMWK* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2623 343 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 334 - -
Gso6g2623 343 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 334 - -
Gso6g2623 343 MobiDBLite consensus disorder prediction 327 343 - -
Gso6g2623 343 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Gso6g2623 343 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Gso6g2623 343 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Gso6g2623 343 MobiDBLite consensus disorder prediction 322 343 - -
Gso6g2623 343 Gene3D NAC domain 16 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2623 Gso-Chr6 48037191 48042912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2623 1 343 NAC Transcription Factor Family AT1G12260 57.584 1.78e-133 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso6g2623 NAM 3.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2623 - - gmx:100775867 680.633