Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2595 ATGGGTTCTAATAGGCCAATTCTAATGACAGTACCATCTCCAACAACTTCTAGTAGTAATAGCCAACAACAACAAGATCACCCTCTCACCTCTATTGATCCTGAGCTTCCAAAATCAAACTCAAGTTCCATCAACCCTTTTGAGAACACTTTCAACAACTCATCATCACGCAGAAGTTCTGCTGGGAGCAGGAGCAGCAACAACTCTATCCATGAAGTGATTAGTTTGAGCCGTTCAGAATCCAAAACCAAACCTCTTAAGTACTATGGCTCATCCAAGGGTGGTGGTGGTGCAGAATCTGAAGGACTCAGCATGTCACAAAGGGAACTAAGAGATGAGGATGCAAGGTTAGTGTACATAAACGACCCTTTGAAAACAAATGAGGCTTTTGAGTTTTCAGGAAACTCAATCCGCACAAGCAAATACTCCCTCCTCACTTTCATTCCAAGGAACCTCTTTGAACAGTTCCACAGGGTTGCCTATGTGTACTTTCTCATAATTGCAATCCTCAACCAGCTTCCTCAGCTTGCAGTGTTTGGAAGAACAGTTTCCATCTTGCCACTGGCCTTTGTGCTGTTTGTCACAGCTGTGAAGGATGTGTATGAGGATTGGAGAAGGCACCAGAGTGATAAAATTGAGAACAATAGGTTGGCATCAGTTATTATGGTTGATGATGATGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGCTTTGTGGAGAAAAAATGGAGGGATGTTAGAGTTGGTGAGGTGATAAAGATCGAGGCAAATGAAACCATCCCTTGTGACATTGTGTTGCTCTCAACTAGTGATCCAACTGGGGTTGCATATGTGCAGACTATAAATCTTGATGGTGAGTCCAATTTGAAGACAAGGTATGCAAAGCAAGAGACACATGGTAAGGAAATGTTTGGTGGGGTTATCAAGTGTGAGAAACCAAATAGGAACATTTACGGATTTCTTGCTAACATGGAAGTTGATGGCAAGAAGTTGTCACTTGGATCATCAAACATTGTGCTTAGAGGATGTGAACTCAAGAACACTAGTTGGGCTATTGGTGTTGCTGTGTATTGTGGGAGTGAGACCAAGGCTATGCTGAATAACTCAGGAGCTCCTTCGAAGAGAAGCCGGTTGGAGACACGCATGAATTCAGAGATCATTTGGCTATCTTTCTTCCTTGTGATGCTGTGTACAGTCACCTCAGCTTGTGCTGCTGTGTGGCTGAAGCGCCACAAGGAAGAGCTGAATCTGTTGCCATATTATAGGAAACTTGATTTTTCAGAAGGGGATGTGGATAGCTATGAATACTATGGATGGGGGTTGGAAATTTTCTTCACATTTCTCATGTCAGTCATAGTTTTCCAGGTCATGATTCCCATTTCCTTGTACATTTCCATGGAACTTGTGAGGGTTGGTCAGGCCTACTTCATGATCCAAGACAAGAGAATGTATGATGAGGCGACAAAGTCAAGGTTTCAGTGCAGGGCTCTGAACATCAATGAAGATTTGGGGCAGATTAAGTATGTTTTCTCTGACAAAACTGGCACTCTCACTCAGAACAAGATGGAGTTTCAATGTGCAAGCATCTGGGGGGTTGATTACAGTTCTAAAGAGAACAATAGCATAATGGAAGGGGATGAGCTTGTTGAACATTATGTGGAAGCGGATGGAAAGATCTTCAGACCAAAGATGAAAGTGAAAGTTAATCCAGAGCTTTTGCAGCTATCAAGAAGTGGACTTCAAAATGTGGAGGGAAAATGGATTCATGATTTCTTTCTGACACTGGCAACCTGCAACACCATTGTGCCTCTTGTTGTTGACACACCTGACCCTGATGTCAAGCTGATAGATTACCAAGGAGAATCACCAGATGAACAAGCACTGGCTTATGCTGCTGCTGCCTATGGTTTTATGCTCATAGAACGAACCTCTGGCCATTTAGTCATTGATATTCATGGACAAAGACAAAAGTTCAATGTCTTGGGTATGCATGAATTTGACAGTGACAGGAAGAGAATGTCAGTTATATTGGGGTACCCTGACAATTCAGTGAAAGTTTTTGTCAAAGGAGCAGACACATCCATGCTTAATGTGATAGACAGGTCATTCAAAATGGACTTAGTAAGAGCCACTGAAGCACATCTTCACTCTTACTCTTCCATGGGTTTGAGGACTCTTGTTATCGGCATGAGAGACTTGAATGCTTCAGAATTTGAGCAATGGCATGCATCCTTTGAGGCAGCAAGCACTGCTGTGTTTGGAAGGGCTGCGATGCTCCGCAAGGTTTCGAGCATCGTAGAGAACAGTCTCACCATATTAGGTGCATCTGCCATTGAAGATAAGCTGCAACAAGGTGTGCCAGAATCCATTGAGTCTCTAAGGATTGCAGGCATTAAAGTATGGGTTCTGACTGGAGACAAACAAGAAACTGCCATATCCATTGGCTACTCCTCAAAGCTCCTAACAAGCAACATGACTCAGATTATAATCAATAGCAAGAACAGAGAATCATGCAGAAAAAGTTTGCAAGATGCCCTTGTCATGTCGACATCTGGCGTTGCCAACAATGCTGGAGTAAGTTCCCATGTGACTCCAGTAGCCTTGATTATGGATGGTACCAGCCTTGTGCATATTCTTGACAGTGAACTTGAAGAACAGCTATTTCAACTTGCAAGTAGGTGTTCTGTTGTTCTATGTTGCCGTGTCGCTCCGCTGCAAAAGGCTGGAATTATTGCCCTTGTGAAGAATAGAACATCTGACATGACACTAGCCATTGGAGATGGTGCTAATGATGTCTCAATGATTCAAATGGCTGATGTTGGAGTTGGCATCAGTGGACAAGAAGGCCGGCAAGCTGTAATGGCATCTGATTTTGCAATGGGGCAGTTTAGGTTTTTAGTTCCTCTCTTATTGATACATGGTCATTGGAACTACCAACGGCTTGGTTACATGATACTGTACAATTTTTACAGAAATGCTGTCCTTGTTCTTGTCCTATTTTGGTATGTGCTCTTCACTGCCTTCACTTTGACAACTGCTATAAATGAATGGAGCTCCACGTTATACTCAATAATCTACAGTTCATTGCCAACTATAATTGTTGGTATTCTCGACAAGGATCTTGGTAAAAGGACTCTCCTTAAGTATCCTCAACTTTATGGGGCAGGACAGAGACATGAGGCCTACAACAAGAAATTATTTTTGTTAACAATGTTAGATACTTTGTGGCAAAGCATGGTTATCTTCTGGGCACCCCTCTTTGCATATTGGAGTAGCACAATTGATGTGGCAAGCATTGGAGACCTTTGGACTTTAGGAGTTGTTATTTTGGTTAATTTACACTTGGCCATGGATGTCATAAGGTGGTATTGGGTGACACATGTTGTCATTTGGGGGTCCATTGTTGCAACTTTCATTAGTGTCATGATCATTGATTCTATCCCCAATCTTCCTGGCTACTGGGCCTTCTTTGATGCTGCAGGAACTGGATTGTTCTGGTTATTGTTGCTTGGAATCATAGTAACAGCATTGCTTCCGCATTTGGTTGTAAAATTTGTTTATCAATACTATTTTCCTAATGATATTCAGATTTGTAGAGAAGCAGAGAAGATTGGGTATGACAGGGTTGTTGAAAGTGGACAGGTAGAAATGCTTCCTATCTCAGATAATCCATCAAGATAA 3681 0.4235 MGSNRPILMTVPSPTTSSSNSQQQQDHPLTSIDPELPKSNSSSINPFENTFNNSSSRRSSAGSRSSNNSIHEVISLSRSESKTKPLKYYGSSKGGGGAESEGLSMSQRELRDEDARLVYINDPLKTNEAFEFSGNSIRTSKYSLLTFIPRNLFEQFHRVAYVYFLIIAILNQLPQLAVFGRTVSILPLAFVLFVTAVKDVYEDWRRHQSDKIENNRLASVIMVDDDGGGGGGGRRRSFVEKKWRDVRVGEVIKIEANETIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETHGKEMFGGVIKCEKPNRNIYGFLANMEVDGKKLSLGSSNIVLRGCELKNTSWAIGVAVYCGSETKAMLNNSGAPSKRSRLETRMNSEIIWLSFFLVMLCTVTSACAAVWLKRHKEELNLLPYYRKLDFSEGDVDSYEYYGWGLEIFFTFLMSVIVFQVMIPISLYISMELVRVGQAYFMIQDKRMYDEATKSRFQCRALNINEDLGQIKYVFSDKTGTLTQNKMEFQCASIWGVDYSSKENNSIMEGDELVEHYVEADGKIFRPKMKVKVNPELLQLSRSGLQNVEGKWIHDFFLTLATCNTIVPLVVDTPDPDVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHLVIDIHGQRQKFNVLGMHEFDSDRKRMSVILGYPDNSVKVFVKGADTSMLNVIDRSFKMDLVRATEAHLHSYSSMGLRTLVIGMRDLNASEFEQWHASFEAASTAVFGRAAMLRKVSSIVENSLTILGASAIEDKLQQGVPESIESLRIAGIKVWVLTGDKQETAISIGYSSKLLTSNMTQIIINSKNRESCRKSLQDALVMSTSGVANNAGVSSHVTPVALIMDGTSLVHILDSELEEQLFQLASRCSVVLCCRVAPLQKAGIIALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMILYNFYRNAVLVLVLFWYVLFTAFTLTTAINEWSSTLYSIIYSSLPTIIVGILDKDLGKRTLLKYPQLYGAGQRHEAYNKKLFLLTMLDTLWQSMVIFWAPLFAYWSSTIDVASIGDLWTLGVVILVNLHLAMDVIRWYWVTHVVIWGSIVATFISVMIIDSIPNLPGYWAFFDAAGTGLFWLLLLGIIVTALLPHLVVKFVYQYYFPNDIQICREAEKIGYDRVVESGQVEMLPISDNPSR* 1227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2595 1226 Gene3D - 769 965 IPR023214 -
Gso6g2595 1226 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 14 1226 - -
Gso6g2595 1226 SUPERFAMILY HAD-like 505 980 IPR036412 -
Gso6g2595 1226 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 14 1226 - -
Gso6g2595 1226 Gene3D - 618 749 IPR023299 GO:0000166
Gso6g2595 1226 Pfam Phospholipid-translocating P-type ATPase C-terminal 953 1193 IPR032630 -
Gso6g2595 1226 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 516 785 IPR023299 GO:0000166
Gso6g2595 1226 SFLD Haloacid Dehalogenase 494 976 - -
Gso6g2595 1226 MobiDBLite consensus disorder prediction 1 107 - -
Gso6g2595 1226 Gene3D - 198 367 - -
Gso6g2595 1226 ProSitePatterns E1-E2 ATPases phosphorylation site. 512 518 IPR018303 -
Gso6g2595 1226 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 442 549 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gso6g2595 1226 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 896 1011 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gso6g2595 1226 SFLD p-type atpase 494 976 IPR044492 -
Gso6g2595 1226 SUPERFAMILY Calcium ATPase, transduction domain A 235 364 IPR008250 -
Gso6g2595 1226 SUPERFAMILY Calcium ATPase, transmembrane domain M 132 1192 IPR023298 -
Gso6g2595 1226 Pfam Phospholipid-translocating ATPase N-terminal 118 184 IPR032631 -
Gso6g2595 1226 MobiDBLite consensus disorder prediction 1 86 - -
Gso6g2595 1226 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 132 1200 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Gso6g2595 1226 Pfam Cation transport ATPase (P-type) 617 696 - -
Gso6g2595 1226 PRINTS P-type cation-transporting ATPase superfamily signature 510 524 - -
Gso6g2595 1226 PRINTS P-type cation-transporting ATPase superfamily signature 925 944 - -
Gso6g2595 1226 CDD P-type_ATPase_APLT_Dnf-like 134 1085 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2595 Gso-Chr6 47754831 47760974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2595 75 1226 Primary Pumps ATPases AT5G04930 67.642 0.0 1647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2595 K14802 - gmx:100813836 2325.82