Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2593 ATGGCCGAAGTGATCAACAACATGCCTCCTGAATCCCTCGACCAATCTCCCTCCTCTTCCGCTCCTCCTCCACCTCCTCCTCCGCCACCCGCCTCTTCCTCCGCCCCCGCCGACGATCTCCCTCCGCCGCCTCTCCCTCCTCCGCCGCGGCGCCGGGACCGCAGGGACGACCGCGACTTTGACCGCCACCCTAACCGCAGCCGGGATTACTACGACCGCGACAGGGACTTCAAGCGCCGCCGCAGCCCTAGCCCCGGCTACCGTGACCGACGATACTCTCCTCCACCACCTTCGCGCCGGTCGCCTCCGCCGTACAAGCGATCCCGGAGAGGAAGCCCCCGCGGCGGGGGGTATGGACCCGATGATAGATTTGGTTATGATTATTCTGGTGGCTATGAACGGGGAGCGGGTGGAAGGACTGGTTATGCAGATGAGAAATCTTATGGCAGGCTTGTACATCGATCTGCTGGGGGATATCATAATGGGATTTCTGATGTGGATAATAGTCGTGGTTATGCAGATTTGTCAAGTGGAGGTGCACAAAGAGAGGGGTTGATGTCCTATAAACAATTCATTCAGGAGCTTGAAGATGATGTGCTGCCAGCTGAAGCTGAGCGTAGGTATCAAGAGTACAAATCAGAGTATATTTCTACACAAAAGCGGGCTTATTTTAATGCTCACAAGGATGAGGAGTGGTTAAAAGATAAATATCACCCAACAAATTTACTAACAGTAATTGAAAGGAGGAATGAAAATGCTCGACGGCTTGCAAAGGATTTTTTGCTTGATTTGCAAAGTGGAACATTAGACCTAAATCCTGGTTTGAACTCCACTTCATCCGGTAAATCAGGGCAAGCCAGTGAACCTAATTCTGAGGAAGAAACAGATGGTAAACGAAGAAGACATGTTAGGGGACCTAATAAAGATAATGATTTCTCAGCTGCTCCAAAAGCTCACCCTATCAGTTCTGAACCTAGACGGATACAAGCAGATATTCAACAGGCTCAGGCTGTTGTTCGTAAGCTTGACAGGGAAAAGGGTATTGAAGATAATATTTTATGCACCAGTGACCATAATAAAAATGATGATAAGGCTCACAGTGGATCTGTGGGCCCCATAGTAATTATCCGTGGCTTAACATCTGTTAAGGGCTTAGAGGGTGTTGAGCTACTTGACACACTTATTACGTATCTTTGGCGGATACATGGTGTTGATTATTATGGTATGGTTGAGACTAATGAGGCCAAGGGTTTTAGGCATGTGAGGCCAGAAGGAGCAGGGCATGAAGAAACAAGTAAATCTGGTTCTGACTGGGAGAAGAAACTTGATTCATTTTGGCACGGAAGGTTGAATGGCCAGGATCCATTGGAAGTGATGACTGCCAAGGAGAAGATAGATGCTGCAGCAACTGATGTGTTGGATCCACATGTTAGGAAAATTAGGGATGAGAAATATGGGTGGAAGTATGGTTGTGGAGCTAAGGGCTGCACAAAGCTTTTTCATGCAGCTGAATTTGTGCACAAACATTTGAAGCTAAAACACCCTGAGATTGTGATGGAACTAACATCCAAAATGCGCGAGGATCTTTATTTTCAAAATTACATGAATGATCCTGATGCTCCTGGTGGAATGCCTGTCATGCAGCAACCTCAGAAGGATAGACCTCTAAAGCGAAGATTAGGAGGTTTAGAGGGCCGATTGAAGGATGACCGTGGTAACCGGCGAGACCAGGACAGAAGTGACAGAATGAATGGAGATAGGCCTGATGGTTCCCCATCCCATGAAAGGCAGATGGGAAACCATGATGAAGCAATGTATGATGCATATGGAGGGCCTGGTGTACCTGCATTTACCTCAGATATGCCCCCTCCACCAGTTTTGATGCCTGTACCTGGTGCTGGGCCTTTGGGACCCTTTGTCCCTGCTCCACCAGAAGTTGCAATGCAGATGTTCAGGGAGCAAGGAGGACCTACATCATTCGATGCCTCGGGAAGGAAGATGCGATCTGGTCCTCATATGGGTGGACCAGCACCTATAATTGCTGTTCCTCCATCCTTTAGACCTGATCCTCGACGGATGCGAAGTTATGAAGATCTAGATGCCCCAGAAGACGAAGTCACTGTGATAGACTATAGGAGCTTGTAG 2145 0.4858 MAEVINNMPPESLDQSPSSSAPPPPPPPPPASSSAPADDLPPPPLPPPPRRRDRRDDRDFDRHPNRSRDYYDRDRDFKRRRSPSPGYRDRRYSPPPPSRRSPPPYKRSRRGSPRGGGYGPDDRFGYDYSGGYERGAGGRTGYADEKSYGRLVHRSAGGYHNGISDVDNSRGYADLSSGGAQREGLMSYKQFIQELEDDVLPAEAERRYQEYKSEYISTQKRAYFNAHKDEEWLKDKYHPTNLLTVIERRNENARRLAKDFLLDLQSGTLDLNPGLNSTSSGKSGQASEPNSEEETDGKRRRHVRGPNKDNDFSAAPKAHPISSEPRRIQADIQQAQAVVRKLDREKGIEDNILCTSDHNKNDDKAHSGSVGPIVIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMVETNEAKGFRHVRPEGAGHEETSKSGSDWEKKLDSFWHGRLNGQDPLEVMTAKEKIDAAATDVLDPHVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPEIVMELTSKMREDLYFQNYMNDPDAPGGMPVMQQPQKDRPLKRRLGGLEGRLKDDRGNRRDQDRSDRMNGDRPDGSPSHERQMGNHDEAMYDAYGGPGVPAFTSDMPPPPVLMPVPGAGPLGPFVPAPPEVAMQMFREQGGPTSFDASGRKMRSGPHMGGPAPIIAVPPSFRPDPRRMRSYEDLDAPEDEVTVIDYRSL* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2593 714 MobiDBLite consensus disorder prediction 16 47 - -
Gso6g2593 714 MobiDBLite consensus disorder prediction 269 327 - -
Gso6g2593 714 MobiDBLite consensus disorder prediction 1 143 - -
Gso6g2593 714 MobiDBLite consensus disorder prediction 48 87 - -
Gso6g2593 714 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 714 IPR039727 GO:0006397
Gso6g2593 714 ProSitePatterns Zinc finger C2H2 type domain signature. 491 514 IPR013087 -
Gso6g2593 714 Pfam Arsenite-resistance protein 2 430 617 IPR007042 -
Gso6g2593 714 MobiDBLite consensus disorder prediction 533 606 - -
Gso6g2593 714 MobiDBLite consensus disorder prediction 552 602 - -
Gso6g2593 714 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 714 - -
Gso6g2593 714 MobiDBLite consensus disorder prediction 289 308 - -
Gso6g2593 714 Pfam SERRATE/Ars2, N-terminal domain 189 270 IPR021933 -
Gso6g2593 714 MobiDBLite consensus disorder prediction 656 688 - -
Gso6g2593 714 MobiDBLite consensus disorder prediction 269 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2593 Gso-Chr6 47732988 47740578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2593 87 714 C2H2 Transcription Factor Family AT2G27100 62.861 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2593 - - gmx:100817569 1203.73