Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2590 ATGGGGTCTCAATGTGGTGGTGATAATAGTGGAAAACATTCACAACTCCAGCCTCTGGTGCCGCAAAATTCAATGTACAGCCTCACACTTGATGAAGTTCAGAATCATTTAGGTGACTTAGGGAAACCTCTAAGTAGCATGAACCTTGACGAGCTTCTAAAAAATGTGTGGACCGTCGAGGCAAACCAGTCCACTGGTGTGGACATTGAGGGTACAGCTCTAACTAGTCAAGCTGCGCTGCAGCGTCAGGCTAGTCTGTCGTTAACTAGTGCTCTAAGCGGGAAGACTGTTGATGAGGTTTGGAGGGATATACAACAAAGCAAAGATAACAAGGATAAGAAGTCTCAGGAAAGACAGTCTACATTGGGAGAGATGACTTTGGAGGATTTCTTGGTAAAAGCAGGGATTGTAGCTGAAGCATCTAATAGGAAGAATACTGGTGCTACAGTCGGCGTTGATTCAAATGTAGTGGCGCCACAGTTTCCTCAACATGGTCCTTGGATACAGTATGCACAACCACAATATCAGCATCCACAACAAGGTTTAATGGGGATTTATATACCTGGACAGAATAAAGCACAGCCATTACACATGGGAGCTGGTGTGGCAACAGATGTTCTGTATGCAGATGGTCAGGTGGCATTGTCTTCACCTGTTATGGGAACCTTGTCAGATACTAGGAGACCTGGCAGAAAACGGGGCACGTCAGAGGATATGGTAGAGAAGACCGTTGAGAGGAGGCAGAAGAGGATGATCAAGAATCGGGAATCTGCTGCCCGTTCTAGAGCAAGGAAACAGGCTTACACAACTGAATTGGAGCACAAAGTCTCTCGTTTGGAAGAGGAAAACGAAAAGCTGAGGAGACAGCAGGAGCTAGAGAAAATGTTGTCAAGCAATCCACCTCCTGAACCTAGATACCAGATTCGCCGAACATCATCGGCTTCATTCTGA 951 0.4606 MGSQCGGDNSGKHSQLQPLVPQNSMYSLTLDEVQNHLGDLGKPLSSMNLDELLKNVWTVEANQSTGVDIEGTALTSQAALQRQASLSLTSALSGKTVDEVWRDIQQSKDNKDKKSQERQSTLGEMTLEDFLVKAGIVAEASNRKNTGATVGVDSNVVAPQFPQHGPWIQYAQPQYQHPQQGLMGIYIPGQNKAQPLHMGAGVATDVLYADGQVALSSPVMGTLSDTRRPGRKRGTSEDMVEKTVERRQKRMIKNRESAARSRARKQAYTTELEHKVSRLEEENEKLRRQQELEKMLSSNPPPEPRYQIRRTSSASF* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2590 316 MobiDBLite consensus disorder prediction 226 292 - -
Gso6g2590 316 Gene3D - 244 299 - -
Gso6g2590 316 MobiDBLite consensus disorder prediction 1 20 - -
Gso6g2590 316 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 2-RELATED 15 314 - -
Gso6g2590 316 Pfam bZIP transcription factor 246 295 IPR004827 GO:0003700|GO:0006355
Gso6g2590 316 SMART brlzneu 242 298 IPR004827 GO:0003700|GO:0006355
Gso6g2590 316 MobiDBLite consensus disorder prediction 220 316 - -
Gso6g2590 316 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 244 289 IPR004827 GO:0003700|GO:0006355
Gso6g2590 316 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 15 314 IPR043452 GO:0003700|GO:0045893
Gso6g2590 316 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 249 264 IPR004827 GO:0003700|GO:0006355
Gso6g2590 316 SUPERFAMILY Leucine zipper domain 246 291 IPR046347 GO:0003700|GO:0006355
Gso6g2590 316 Coils Coil 265 299 - -
Gso6g2590 316 CDD bZIP_plant_BZIP46 246 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2590 Gso-Chr6 47683538 47689620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2590 17 316 bZIP Transcription Factor Family AT3G56850 55.049 7.82e-94 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso6g2590 bZIP_1 4.4e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2590 K14432 - gmx:100811685 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1024 4 15114536 15120559 Gso6g2590 6 47683538 47689620 GST