Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2559 ATGGGTTCCCTTTTTATTGAAGAAACTGAAATTGTAGGATTTAAATTGCCAAGAGATGAATTGGTTGGTTGGCTGTTGAAGGGCACAGAAGAGCGAACAGTGATTTCAGTGGTAGGGATGGGAGGACTTGGAAAAACCACTCTTGCCAAGCATGTTTTTGATAGTGAAAAAGTAAAAGGTCACTTTGATTATCGTGCTTGCATCACAGTTTCTCAATCATACAGTGTCAGAGGGTTATTCATAGAAATGATAAAGCAATTTTGTAGGGAGGCAAAAGACCCTCTTCCAGAAATGTTACACGAAATGGACGAGAAGTCACTAATTTCTGAAGCGAGGCAATACTTGCAGCACAAAAGGTATTTGATATTCTTTGATGATGTATGGCATGAAGATTTTTGTGACCAAGTTGAATTTGCCATGCCTAATAACAATAGAAGTAGCAGGATCATAATCACCACTAGAATGATGCATGTTGCTGAGTTTTTCAAGAAATCCTTTCCTGTTCATATTCTCAGCCTACAACTGTTGCCTCCAGACAAAGCATGGGAACTCTTTTGCAAGAAGGCATTCAGATTTGAGCTACACGGGCAATGTCCTGCACTGCATGAAGGTATGTCAAATGAAATTGTTAGAAAATGCAAGGGGCTGCCTTTGGCGATTGTAGCCATTGGTGGTCTACTTTCAACAAAATCAAAAACTGTCTTTGAATGGCAAAAGGTGAATCAAAATCTAAACCTCGAGTTGCAGCGTAATGCCCATCTCACTAGTATAACAAAGATTTTATCTCTCAGTTATGATGACCTGCCTTACTATTTGAAACCATGCATTTTGTATTTTGGAATATATCCACAGGACTACTCCATTAATCATAACAGGTTAACACGACAATGGATAGCTGAAGGGTTTGTTCAGTCTGATGGAAGAAGAACTTCAGAGCAAATTGCAGATGAGTACTTATCCGAGTTAATTTATAGAAGCCTGGTTCAAGTCTCAACAGTTGGCTTTGAAGGGAAAGTTAAAAGTTGTCAAGTCCATGATATATTACATGAAATGATAGTAAGAAAATTGAAGGACTTGTGTTTTTGCCATTTTGTGCATGGAGGTGATGAGTCAGCCACAAGTGGAACAACTAGACGCTTATCTGTAGACATTAGTTCCAACAATGTGTTGAAGAGCACTAACTACACACACATTCGTGCTATTCATGTTTTTGGGAATGGAGGACTGCTTGAGCTTTTCACGGGTCTCTTATCTTCAAAGTCAAGGGTTTTGAAAGTACTCGACCTTCATGGTACATCCTTAAATTATATTTCAGGTAATTTAGGGAATCTTTTTCACTTAAGGTACCTAAATCTAAGGGGTACGAAAGTACAGGTTCTTCCTAAATCTCTTGGTAAGTTGCAGAACTTAGAGACCTTGGACATAAGAGACACATTGGTTCATGAGTTACCAAGTGAAATAAACATGCTCAAAAAGTTAAGACATCTTCTTGCTTTCCATCGAAACTATGAAGCACGTTATTCTCTCTTGGGATTTACAACTGGTGTGCTAATGGAAAAGGGTATTAAAAACTTGACTTCCCTATTAAAACTTTGCTATGTGGAGGTAGATCATGGTGGGATAGATCTCATCCAAGAGATGAAATTCTTATGGCAATTAAGCAAGTTAGGCTTAAGGCGTGTTCGGAGGGAATATGGGAATGCAATATGTGCTTCCGTGGTAGAGATGAAACACCTTGAATCACTTGATATCACTGCAATAGGTGAGGATGAAATCATTGACTTGAACCCTATATCATCCCTACCCCAACTTCGACGACTTAAATTGAAAACAAGATTGGAGAAGATGCCTAATTGGATTTCAAAACTTGAGTTTCTTGTTGAGATAAGACTGGGTTTATGCAATTTGAAAGATGATCTTTTAAGATCGCTAGAAAACTTGCCAAATTTGTTGAAGCTTGGTATTTGGGACAATGCCTATGGTGGTGAAATTTTGCATTTTCAAAGTGGAGGGTTTCCAAAATTGAAGGAACTGTATCTAGCTCGCTTGAATAGAGTAAATTCTGTATTAATAGATAAAGGAAGTTTGCTTTCTCTTGAATATTTTATAATTGCCAAAATCCCCCATCTCAAGAAGCTATCCTCAGGCATCAAAGCCTTGGATAACCTTAAAGTTATTGACTTCCAAGATATGTCAACTGAGCTTGTTGAGAGCATTGATCCAAAAAAAGGTCAAGATTATGAGATCATCAATCATGTTCCCCAAGTACTCATCCGTCATTGGATTGGCCCAAAACTCTATGATTTTGACATCCGCTCTATTCACTAG 2328 0.3819 MGSLFIEETEIVGFKLPRDELVGWLLKGTEERTVISVVGMGGLGKTTLAKHVFDSEKVKGHFDYRACITVSQSYSVRGLFIEMIKQFCREAKDPLPEMLHEMDEKSLISEARQYLQHKRYLIFFDDVWHEDFCDQVEFAMPNNNRSSRIIITTRMMHVAEFFKKSFPVHILSLQLLPPDKAWELFCKKAFRFELHGQCPALHEGMSNEIVRKCKGLPLAIVAIGGLLSTKSKTVFEWQKVNQNLNLELQRNAHLTSITKILSLSYDDLPYYLKPCILYFGIYPQDYSINHNRLTRQWIAEGFVQSDGRRTSEQIADEYLSELIYRSLVQVSTVGFEGKVKSCQVHDILHEMIVRKLKDLCFCHFVHGGDESATSGTTRRLSVDISSNNVLKSTNYTHIRAIHVFGNGGLLELFTGLLSSKSRVLKVLDLHGTSLNYISGNLGNLFHLRYLNLRGTKVQVLPKSLGKLQNLETLDIRDTLVHELPSEINMLKKLRHLLAFHRNYEARYSLLGFTTGVLMEKGIKNLTSLLKLCYVEVDHGGIDLIQEMKFLWQLSKLGLRRVRREYGNAICASVVEMKHLESLDITAIGEDEIIDLNPISSLPQLRRLKLKTRLEKMPNWISKLEFLVEIRLGLCNLKDDLLRSLENLPNLLKLGIWDNAYGGEILHFQSGGFPKLKELYLARLNRVNSVLIDKGSLLSLEYFIIAKIPHLKKLSSGIKALDNLKVIDFQDMSTELVESIDPKKGQDYEIINHVPQVLIRHWIGPKLYDFDIRSIH* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2559 775 Gene3D Ribonuclease Inhibitor 386 745 IPR032675 -
Gso6g2559 775 Pfam NB-ARC domain 19 267 IPR002182 GO:0043531
Gso6g2559 775 Gene3D - 6 166 IPR027417 -
Gso6g2559 775 PANTHER - 9 734 - -
Gso6g2559 775 PRINTS Disease resistance protein signature 34 49 - -
Gso6g2559 775 PRINTS Disease resistance protein signature 114 128 - -
Gso6g2559 775 PRINTS Disease resistance protein signature 213 227 - -
Gso6g2559 775 PRINTS Disease resistance protein signature 465 481 - -
Gso6g2559 775 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 279 IPR027417 -
Gso6g2559 775 Gene3D - 176 264 IPR042197 -
Gso6g2559 775 SUPERFAMILY L domain-like 344 732 - -
Gso6g2559 775 Gene3D - 265 355 IPR036388 -
Gso6g2559 775 PANTHER DISEASE RESISTANCE PROTEIN RP 9 734 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2559 Gso-Chr6 47337242 47341660 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2559 35 232 WRKY Transcription Factor Family AT5G45050 29.064 1.00e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2559 K13457 - gmx:100801561 1267.29