Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2557 ATGAACGACATCATCGCGTGTGCTGCTGCTGCAGCTAACTCTTCTCTTCCAACCTCTGTGTTGGGTGTTCTTCACTTTCTCCACTCCCGAGGAAGATCCTCCTCTTGTGTTCACACTCCCTCTGAACTTCTAAGGGACTTTGCCACAAGAGAGTTCAATGCGTTTCTGTGGCTATGTCTCGTTGCTGTCACCACCCTTTTGCTCAGAAGACTCTTCAATCTCTTTAGGCTGTGGCATAGGGCCAAAACCATTCCTGGGCCACCCTCTCCCTCTTTCTTTGGACACTGCAAGCTTTTTTCCCGGCAAAATTTCACCTTCACTGACGTGTTGTCAGAATCCCATCAAAAGTATGGACCTATTGTTAAGCTGTGGTTAGGTCCTACTCAGCTGTTGGTGTCCGTTACGGATCCAGCACTAATTCAAGAGATGCTTATAAAGGCCAAGGATAAGTTGCCTTTTACCGGAAAAGTGTTTCATCTTGCCTTTGGGGAATCAAGCCTCTTTGCCCCTTCCTTTGAAAAGGTGCAAAAGAGAAGGGAACTATTGGCAAATGAATTACATGAAAGATTGTTGAAGAGTGACGATGTGATTCCTATGAAGGTTGCAGACTTCATAACAGATAAAATAGAAAACATCAGAACCAAACGAGGTATCAATTCTAGGTTGGTTTCTCAGCATATGGCTTTCACAATAATGGGAGCCACATTCTTTGGAGATGGCTTCTTGGCTTCGCCAAAGGCTGCAATATATGAGGAACTGTTTATGATGATTGCTAAAGATGCTTGCTTTTGGGCCTCCTATAATGTAACTCCTTTTTGGAGACATGAATTTTGGAGGTATCAATGCTTATGCACAAAGTTGAAATGCTTAACTCAAGACATCCTTCAACATTTTAGAAAAGGCTGCAAACTATTTGGCCAAACTGACCAAGATGTACGAAATGAAAGTTCCAACAAAGAAACGAAGTCAGCAGATGGTGCACAGTGCTGTTCTGATGATGACTTCCAAGATTACTTTTTCTTTCGTGATCTTAAGGATCATCAAGATGGTAAAGAAGAACCTTGTGGGAACATCATGCGTGTGATATTTCATGGATGTCAAACTACATCTGCTTTAATCACCAATGTATTGACTAGGCTTGTCATGCATCTGGAAATACAGGATAAGGTTTATTCGGAGATTAGCATTGTAGGAAGAAACCCATCAAAATATGAGCATGAAGATGTTTATAGGATGCCTTTGTTATTGGCTACAATTTATGAATCTGCACGCCTTCTGCCCACTGGTCCAATGCTGCAGAGGTGTTCTTTGAAACATGACTTGTGCTTTGCAACTGGTTTAACCATACCTGCTGGAGCTGTACTGGTTGTACCTGTCGAATTGGTACACAAGGATGACTCTAGTTGGGGGAGTGATGCAAGTGATTTTAATCCTTACCATTTTTTGTCAACGGGTACAAAAGGATCAGGTTCTACTGAAGACCTTTCTATTACAGGAGTCAGTTCATGTGTACTAAATGATCCAAATGAAAATGCAGCATTTCTTCCTTTTGGATCTGGTACACGTGCTTGCATTGGACAGAAATTCATCATCCAACTTGTTGCCTCAGTGTTGGCATCATTGCTAAAAAAATATGAGTTACGGCTTAACTCGGGATCAGATGAGGACTCAAACACAACCTTGAAGAATAATCTTCATCAGCATCATCCTAACTCACAGATATTATTTGTGAAAAGGGACCAGTGA 1746 0.4175 MNDIIACAAAAANSSLPTSVLGVLHFLHSRGRSSSCVHTPSELLRDFATREFNAFLWLCLVAVTTLLLRRLFNLFRLWHRAKTIPGPPSPSFFGHCKLFSRQNFTFTDVLSESHQKYGPIVKLWLGPTQLLVSVTDPALIQEMLIKAKDKLPFTGKVFHLAFGESSLFAPSFEKVQKRRELLANELHERLLKSDDVIPMKVADFITDKIENIRTKRGINSRLVSQHMAFTIMGATFFGDGFLASPKAAIYEELFMMIAKDACFWASYNVTPFWRHEFWRYQCLCTKLKCLTQDILQHFRKGCKLFGQTDQDVRNESSNKETKSADGAQCCSDDDFQDYFFFRDLKDHQDGKEEPCGNIMRVIFHGCQTTSALITNVLTRLVMHLEIQDKVYSEISIVGRNPSKYEHEDVYRMPLLLATIYESARLLPTGPMLQRCSLKHDLCFATGLTIPAGAVLVVPVELVHKDDSSWGSDASDFNPYHFLSTGTKGSGSTEDLSITGVSSCVLNDPNENAAFLPFGSGTRACIGQKFIIQLVASVLASLLKKYELRLNSGSDEDSNTTLKNNLHQHHPNSQILFVKRDQ* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2557 581 Gene3D Cytochrome P450 76 575 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g2557 581 PANTHER CYTOCHROME P450 4C3-RELATED 57 561 - -
Gso6g2557 581 PRINTS P450 superfamily signature 364 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g2557 581 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g2557 581 PRINTS P450 superfamily signature 515 524 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g2557 581 PRINTS P450 superfamily signature 524 535 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g2557 581 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 517 526 IPR017972 GO:0005506|GO:0016705
Gso6g2557 581 PRINTS E-class P450 group I signature 114 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g2557 581 PRINTS E-class P450 group I signature 373 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g2557 581 PRINTS E-class P450 group I signature 514 524 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g2557 581 PRINTS E-class P450 group I signature 524 547 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g2557 581 SUPERFAMILY Cytochrome P450 76 579 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g2557 581 Pfam Cytochrome P450 85 574 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g2557 581 PANTHER CYTOCHROME P450 FAMILY 4 57 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2557 Gso-Chr6 47309693 47315802 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2557 52 570 Cytochrome P450 AT1G13710 23.596 2.29e-23 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2557 - - gmx:100809563 1132.86