Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso6g2555 | ATGGGGTCTATGAGTAACTCAAATCCAAATCCATGGACTCCAAAGGATTGTTCTGAAGGAATTTGTAGCATCTATTGTCCTCAGTGGTGTTACATAGTGTACTCTCCTCCTACTCCAATTCTACTAGGTGATGGTGATGATGACCCTTCTGGATTTGAATTCTCTCCTCTCATAGTTGCTGCGATTGGAATCTTGGCTAGTACTTTCATCTTGGTCACTTACTATACCATTATCTCAAGGTTATGCAGGCAAAGACACAACACAAATGATCCAACAGAAGACGATGGAAACAGCGAATTGGCGCGAATTTCTTCGTCTGCCAATTCTGGTTTGGATGAGGCTCTCATCAAATCCATCAGGGTTTGCAAGTACAACAAGGGTGGTGGGTTGGTGGAAGGTCACGATTGTTCGGTTTGTTTGATCGAGTTCCAAGAGAATGAAAACTTGAGATTGTTGCCAAAATGCAACCATGCTTTTCATCTCCCTTGCATTGATACTTGGCTCAAGTCTCATGCTACTTGCCCTTTGTGTCGTTCTTCTGTCACCGCTTGTCCAAATCCGAATCCAAATTCTTCCATGGAACCCCCACCAAGAGTCATTGTTAATGCCTTGGGACACCAACTTAGGAGTAACCATGTTGTTGTTGTTGAGAGTTCTGAGGAACAACAGAAAGATGGTTAG | 681 | 0.4332 | MGSMSNSNPNPWTPKDCSEGICSIYCPQWCYIVYSPPTPILLGDGDDDPSGFEFSPLIVAAIGILASTFILVTYYTIISRLCRQRHNTNDPTEDDGNSELARISSSANSGLDEALIKSIRVCKYNKGGGLVEGHDCSVCLIEFQENENLRLLPKCNHAFHLPCIDTWLKSHATCPLCRSSVTACPNPNPNSSMEPPPRVIVNALGHQLRSNHVVVVESSEEQQKDG* | 227 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso6g2555 | 226 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 97 | 184 | IPR013083 | - | |
Gso6g2555 | 226 | ProSiteProfiles | Zinc finger RING-type profile. | 136 | 178 | IPR001841 | - | |
Gso6g2555 | 226 | SUPERFAMILY | RING/U-box | 130 | 193 | - | - | |
Gso6g2555 | 226 | Pfam | Ring finger domain | 135 | 178 | IPR001841 | - | |
Gso6g2555 | 226 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 12 | 203 | IPR044675 | - | |
Gso6g2555 | 226 | PANTHER | RING-H2 FINGER PROTEIN ATL53-RELATED | 12 | 203 | - | - | |
Gso6g2555 | 226 | CDD | RING-H2_PA-TM-RING | 135 | 178 | - | - | |
Gso6g2555 | 226 | SMART | ring_2 | 136 | 177 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso6g2555 | Gso-Chr6 | 47284868 | 47285891 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso6g2555 | 7 | 187 | C3H Transcription Factor Family | AT5G17600 | 56.771 | 8.48e-64 | 200 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso6g2555 | - | - | gmx:100809014 | 466.848 |