Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2553 ATGGAATTGCCTCCGCAGTTGGGTTCAAGAGGGGCAGAAGCACTTAAACATATAGCTCCTGGATCATCAATTTCTGTTGCATATCACCCATCTTTTGGACCATATGAAGACCTCCTCTTTCTAGAGCTTGATGAGAAACTTCTCCCAGATGTTCTGAATGAAAGGGTGGTCTTGAGAGGACAGCCTGACGAAGATGCAGTTCTTTGTACTCAATCCAAGACATACGCTATGAAGTTTGTTGGAACTTCCAATTCTGTTCTGCTTGTACCACCTGCAAATCATTCAGAATATTATGAAAATCAACTAAAGAATGATAGTAATAGTGATGAAGAGAAAGTTGTTGTACCTGTACTCAAAGTTGTATCTGGTAATATGGAGCTTATTGAGACAGCCCCCAGACTTGATAAGCTTAAATCACTTCTGTCAGAAAAACCTTACAAATTGGAGGAGGATGACATGGGAAATTTAGAAGAGAATCAGGAATCTAGAATAGGATTATATAACTGGAATGATCTAGTAGACAATATTCAAGCTAGTGATGAGGAATTATTGTCCGGACTGCAGGCTCTTTCGGCACTGGAGATTTATGGGTATTGGAGATTAGTTGACGGGAGTTACATGGACATGATTCTGGGAATGATTTTGAAAAATGCAGTGTTGAATGACTGGTCACTTAATGCTTTAAATGAAGATGAAGTTGTGAGTACACTGGAATCAGATGGATTTCCTGGGGTGCTTGCTAGGCATTGTTTGAATGTATATGGTAACAGAGTAAATGAGTGCATGCCTAGCTTAGTCTGGAAGTTGGATGAGAAGCGAGTATGCATACATTTTGCAAGAGACATCCTAAAAGGGGGTAAGAGGAAGTTAGAGAGTTTCATGGATGAATGGAGGCAGAAGATTCCAGACGGAATGCAGCCCACTTTTGATCTTGTGGAAGGAGAGGTATTAACAGAGAAAATTGGAGTTGAAACATGGGTCCACGCCTTCAGTGTCGCTTCTTTGCCTTCCACTCCAGCTGAGCGTTTCTCTATTCTTTTCAGAGAGAGGCCAAAATGGGAATGGAAAGATCTTCAACCCTATATCAGAGATCTGAAGTTACCGGGTCTTTCTTCAGAAGGTTTGCTACTCAAATACACTCGAAGGACACAACCATCAGCTGATGCAGAACCAGTTTTCAGTGCAAGATAG 1191 0.4123 MELPPQLGSRGAEALKHIAPGSSISVAYHPSFGPYEDLLFLELDEKLLPDVLNERVVLRGQPDEDAVLCTQSKTYAMKFVGTSNSVLLVPPANHSEYYENQLKNDSNSDEEKVVVPVLKVVSGNMELIETAPRLDKLKSLLSEKPYKLEEDDMGNLEENQESRIGLYNWNDLVDNIQASDEELLSGLQALSALEIYGYWRLVDGSYMDMILGMILKNAVLNDWSLNALNEDEVVSTLESDGFPGVLARHCLNVYGNRVNECMPSLVWKLDEKRVCIHFARDILKGGKRKLESFMDEWRQKIPDGMQPTFDLVEGEVLTEKIGVETWVHAFSVASLPSTPAERFSILFRERPKWEWKDLQPYIRDLKLPGLSSEGLLLKYTRRTQPSADAEPVFSAR* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2553 396 Pfam Sister chromatid cohesion protein Dcc1 40 362 IPR019128 GO:0007064|GO:0031390
Gso6g2553 396 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 19 396 IPR019128 GO:0007064|GO:0031390
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2553 Gso-Chr6 47254080 47257974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2553 11 396 C3H Transcription Factor Family AT2G44580 56.888 1.88e-160 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2553 K11271 - gmx:100807595 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1058 4 16852439 16854911 Gso6g2553 6 47254080 47257974 GST