Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2543 ATGGGTGCAGCAGAAGATCTTGTGAACAGCACACCGGGTGCAGCAGAAAGTAAGGGAAACCACACCCCAGGTCCTTCAGAAAATCCAATAAAGGACAACACCAGTACTTCAGAAAATCCTGTAAAGGACAAAGCACTAGGTGCAGAAATTCCTGAAGCTGGAGGTGCTGAAAATCCTGGAAGTGACCAAAAAAATGTTGAACAAAATCCTGCAAGTGAGCAAGTCAGTATTGCAGAAAATATGGTAAATGACCAAGCAGGTGTCACAGATAATACTGCAAAGGAGCAGGTAGCAGGTAGTGCAGAGGATCCGACAAAGAACCAAGCAGCGGGTGGTGCAGAAGATCCCCCAAAGGACCAAGTGGCAGGTGGTGCAGAAAATCCTTTAAATGACCTGATAGATCTTGCACAAAATCCTGATAGTGAACAAGCAGGTAGTGAGGAAAATCTGTTAAACAACCAAGCAGGTGGTGTAGAAAATTCTGCAAAGAACCATGCAGCAGCTGGTGCAGGAGATCCTCCAAATGACCAAGCAGCAGATGGTTCAGAGAATTCCGCAAAAAACATATCAGCACGTAGTGCAGGAGATCCTCCACATGACCAAACAGCAGATGGTATAGAAAATTCTTTAAGCAACCAATCAGAAGCTACAGAGAAACTTGTAAATGATGAACAGGGTCCTGCAGAAAGTTTTGTAGAAGATGAAGTACATGTTATTGAAACGCCTGAAAAGTGCCAAAAATATGGTGTTGAGACCCCTATAAGCAGCAAAGCAGAACGCCTCCCAGAAGAAGCAAAAGAGATACTGAAATCATTGGCAAGTAAATGGGAGGATGTATTTGATGCAAATGCATTGCAGGTGATCCCTCTCAAAGGGGCAATGACCAATGAGGTATTCCAGATAAAGTGGCCAACTACGACAGGGGAATTGTCACGAAAGGTTCTTGTTAGAATGTATGGTGAGGGTGTGGACGTGTTCTTTAATAGAGATAATGAGATCCAAACATTTGAATTCATGTCAAAGAATGGGCAAGGTCCTCGTCTACTAGGACGATTTATGAATGGCCGTGTTGAAGAGTTTATCCATGCACGGACATTATCAGCATCCGATCTACGTGATCCATCTATTTCTGCTCTTATAGCGACCAAAATGAAGGAATTCCATGATCTAGATATGCCTGGTGAAAAGAAAGTCCATCTTTGGGATAGATTGCGAAATTGGTTTAGTGAAGCCAAACGCTTATCGTCACCTAAAGAATTTGAAGCTTTTTATTTGGACACAATCGACAAAGAAATCTCTATTTTGGAAAAGGAACTATCAGGCCCACACCAACGAATAGGATTTTGCCACAATGATTTACAATATGGTAACATAATGCTTGATGAAGAGACCAATTCTGTGACCATCATAGACTATGAATATGCTAGTTATAATCCTGTGGCATTTGATATAGCAAACCACTTCTGTGAGATGGCTGCTAACTATCACACAGAAGAGCCTCATATCCTTGACTACAATAAATATCCTGATTTTGAGGAGCGTCAAAGATTTGTGCAGGCATATTTGAGTACCTCTGGTGAGCAGCTGAGTAACAGTGAAGTGGAGCAGCTACTTCAAGAAATTGAGAAGTATACACTTGCAAATCATCTATTCTGGGGCGTTTGGGGAATAATTTCGGCACAAGTGAACACTATCGACTTTGACTACAAGGAGTATGCTAAACAGAGGTTTCAAGAGTACTGGGCAAGGAAACCTTATCTTTTAATAAACTCTGAAGCACCTTCTCCTTATAATGTGCCTGAGGGTACAGGAGAGCTAGCCTCAGCATTGCCCACCAAATCGAAGAACTCTGGTATCTTTAGGAAGATGAAGAGAGTTTTGGGTCTCGGTTTGTTCAAGTCTAAGAGCTAG 1911 0.4218 MGAAEDLVNSTPGAAESKGNHTPGPSENPIKDNTSTSENPVKDKALGAEIPEAGGAENPGSDQKNVEQNPASEQVSIAENMVNDQAGVTDNTAKEQVAGSAEDPTKNQAAGGAEDPPKDQVAGGAENPLNDLIDLAQNPDSEQAGSEENLLNNQAGGVENSAKNHAAAGAGDPPNDQAADGSENSAKNISARSAGDPPHDQTADGIENSLSNQSEATEKLVNDEQGPAESFVEDEVHVIETPEKCQKYGVETPISSKAERLPEEAKEILKSLASKWEDVFDANALQVIPLKGAMTNEVFQIKWPTTTGELSRKVLVRMYGEGVDVFFNRDNEIQTFEFMSKNGQGPRLLGRFMNGRVEEFIHARTLSASDLRDPSISALIATKMKEFHDLDMPGEKKVHLWDRLRNWFSEAKRLSSPKEFEAFYLDTIDKEISILEKELSGPHQRIGFCHNDLQYGNIMLDEETNSVTIIDYEYASYNPVAFDIANHFCEMAANYHTEEPHILDYNKYPDFEERQRFVQAYLSTSGEQLSNSEVEQLLQEIEKYTLANHLFWGVWGIISAQVNTIDFDYKEYAKQRFQEYWARKPYLLINSEAPSPYNVPEGTGELASALPTKSKNSGIFRKMKRVLGLGLFKSKS* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2543 636 PANTHER CHOLINE/ETHANOALAMINE KINASE 250 596 - -
Gso6g2543 636 MobiDBLite consensus disorder prediction 1 207 - -
Gso6g2543 636 Gene3D Phosphorylase Kinase; domain 1 272 360 - -
Gso6g2543 636 Gene3D - 320 581 - -
Gso6g2543 636 MobiDBLite consensus disorder prediction 61 103 - -
Gso6g2543 636 SUPERFAMILY Protein kinase-like (PK-like) 251 588 IPR011009 -
Gso6g2543 636 CDD ETNK_euk 285 583 - -
Gso6g2543 636 Pfam Choline kinase N terminus 208 283 IPR007521 GO:0016773
Gso6g2543 636 MobiDBLite consensus disorder prediction 134 160 - -
Gso6g2543 636 MobiDBLite consensus disorder prediction 212 231 - -
Gso6g2543 636 PANTHER CHOLINE KINASE 2-RELATED 250 596 - -
Gso6g2543 636 MobiDBLite consensus disorder prediction 13 41 - -
Gso6g2543 636 Pfam Choline/ethanolamine kinase 312 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2543 Gso-Chr6 47156053 47162459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2543 249 592 Acyl Lipid Metabolism Gene Families AT1G74320 67.151 8.28e-179 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2543 K14156 - gmx:100804928 1280
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1088 4 17643973 17649784 Gso6g2543 6 47156053 47162459 GST
Gso6g2543 6 47156053 47162459 Gso11g2231 11 38013919 38020131 PCT
Gso11g2231 11 38013919 38020131 Gso6g2543 6 47156053 47162459 PCT