Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2536 ATGTCTGAGATATCGAACTCCAAAGCCACCGTGGTGGAAGATTGTCGTGGCGTTCTTCATGTCTATAACGACGGTTCCATTGTACGTTCTTCACGTCCAAGCTTCAACGTACCTATAAACGACGATGGCACCGTTTTGTGGAAAGATGTCGTTTTTGACACTGCACTTGATCTTCAGCTTCGGCTCTATAAGCCAGCCGACGACTCAGCCGGATCCAAGCTTCCCATTTTCATTTATATCCACGGTGGCGGCTTTTGCATCGGCTCGCGCACTTGGCCTAACTGTCAAAACTATTGTTTCCAGCTTACTTCTCGGCTTCGAGCCGTGGTTGTTGCCCCAGATTATCGGCTTGCTCCCGAGAATCGACTCCCCGATGCGATCGAGGATGGCTTTGAGGCTCTTAAGTGGCTTCAAACTCAAGCCGTGAGTGATGAGCCAGACCCGTGGCTCAGCCACGTGGCTGATTTTAGCCATGTGTACATTTCGGGTGACTCAGCTGGAGGGAACATAGCTCATCACTTAGCGGCTCGGCTTGGGTTTGGGTCTCCCGAGTTGGATCCGGTTCGGGTTAGGGGTTATGTTCTATTGGCCCCTTTCTTTGGTGGAACTATCCGAACCAAGTCAGAAGCTGAAGGACCAAAAGATGCTTTTCTCAATTTAGAACTTATTGATAGCCAGAGCCTTGAAGCAATTAATTTCGACCCAATTCTAGTGGTGGCTGGAGGGAGTGACTTGCTTAAAGACAGGGCAGAGGATTATGCAAAATGGCTTAAGGAGTGGGGTAATAAAGATATAGATTATGTAGAATTTGAAGGACAACAACATGGTTTCTTCACTATTGATCCCAACTCAGAACCATCAAACAAGTTGATGCTGATCATCAAACAATTCATAGAGAAGCATTTGGGGAAAGTTTGA 918 0.4728 MSEISNSKATVVEDCRGVLHVYNDGSIVRSSRPSFNVPINDDGTVLWKDVVFDTALDLQLRLYKPADDSAGSKLPIFIYIHGGGFCIGSRTWPNCQNYCFQLTSRLRAVVVAPDYRLAPENRLPDAIEDGFEALKWLQTQAVSDEPDPWLSHVADFSHVYISGDSAGGNIAHHLAARLGFGSPELDPVRVRGYVLLAPFFGGTIRTKSEAEGPKDAFLNLELIDSQSLEAINFDPILVVAGGSDLLKDRAEDYAKWLKEWGNKDIDYVEFEGQQHGFFTIDPNSEPSNKLMLIIKQFIEKHLGKV* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2536 305 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 159 171 IPR033140 -
Gso6g2536 305 PANTHER CARBOXYLESTERASE 15-RELATED 226 299 - -
Gso6g2536 305 PANTHER CARBOXYLESTERASE 15-RELATED 8 224 - -
Gso6g2536 305 PANTHER ARYLACETAMIDE DEACETYLASE 8 224 - -
Gso6g2536 305 PANTHER ARYLACETAMIDE DEACETYLASE 226 299 - -
Gso6g2536 305 Gene3D alpha/beta hydrolase 19 303 IPR029058 -
Gso6g2536 305 SUPERFAMILY alpha/beta-Hydrolases 11 303 IPR029058 -
Gso6g2536 305 Pfam alpha/beta hydrolase fold 78 211 IPR013094 GO:0016787
Gso6g2536 305 Pfam alpha/beta hydrolase fold 231 278 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2536 Gso-Chr6 47088908 47090537 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2536 5 227 Carbohydrate Esterase AT1G68620 39.823 7.73e-44 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2536 - - gmx:100801391 601.282