Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2533 ATGTTCAACGGTATGATGGATCCCGATTTGATGAGAATCGCTCAGGAGCAGATGAGTCGCATGTCACCCGCTGAGTTGGCTCGGATCCAACAACAGATGATGTCTAATCCAGAGCTGATGAGGATGGCCTCCGAGAGCATGAAGAACATGAGTTCTGAAGACTTTAAACTTGCTGCTGAGCAGTTAAAGCATACTCGTCCGGAAGAAATGGCTGAGATTGGTGAGAAGATGGCTAATGCGAGTCCTGAGGAAGTGGCAGCGATGCGATCCCGGGTTGATGCCCAGATCAAATATCAGTTGAGTGCGGCTGAGATGTTGAAGAAGCAGGGAAATGATCTTCATAATCAAGGAAGGTACAATGATGCTTTGAAGAAGTATATACTTGCTAAGGAAAACATTAAAGAGGTACCATCTTTCCAAAGTAGAAAGCTTCTTTTGGCATGCTCTCTGAACTTGATGTCCTGTTACTTGAAGACAAGGCAGTATAATGAATGTGTAAAAGAAGGTTCTGAGGTTTTGGCATATGATGCAAAGAATCTTAAGGCTCTTTATCGAAGAGGTCAAGCATATAAGGAACTAGGTCTTCTAAAAGATGCCGTTTCTGATCTGAGCATGGCACTTGAAGTGTCCCCTGATGATGATACAATTGCAGAGCTTTTACGGGATGCCAAGGAAAAATTGGCAATGGATGGTGGTGAGCATGCACCTGGAAGACTAGTAATTGAAGAAATAACTGAAAATGTGCCTTCTGGAAGCTCTTCTTTGGAACAAACAGTGGTTCAACCAAAAAAATCTGGTGACTCCTCTAAGAGTTACAGAACAGCTAACAATGGAAATCCAAAAACAAATGCAGACAGTTTAGATGCATTGAAAAAAGATCCTGAAGCTGTCAGATCATTCCAAAACTTTATTTCAAATGCCGATCCTGACATGCTGGCTTCTTTGAATGCTGGACAATTCAAAGACGTGTCTCCAGATATGATTAAAACTACCTCTGATATGGTTAGTAAAATGTCACCTGAGGAACTTCAAAGAATGCTTGACATGGCTTCTTCATTTCAAGGGGACAACCCATTTTTTAGAGGAGGTTCCCCTGATTCTTCTTTCAACCCTGGATCAATGCCTCCAAACGTGACACCTGATATGTTTAAAGCAGCAAGTGATATGATGAGTAAAATGCCAGCAGACGAACTTAAGAGGATGTTTGAAATGGCATCCTCACTGAAAGGGAAAGAATCTACTCCATTAGCAGCAGCAGTAGATGAGAATGAAAGAAATGTTTCGCGGTCAAACTTACCATCATCAAGTACTAATGGAACTACCGCTTTTGGAGAATCAAGTTCTCATAACGTGTTTTCAAATATGAGAAATGCTTCTCAGTCAAACTTCCCTTCCTCGAGTACCGATCTACAAGAACAGATGAGAAACCAGATGAAAGATCCAGCCATGCGGAAGATGTTCTCATCCATGGTTAAAAATATGAGCCCGGAAATGATGGCTAACATGGGTGAACAATTTGGTGTTAAGCTTTCACCAGGAGAAGCTGCAAAAGCTCATCAAGCCATGTCATCCTTATCACCGGAGAGCTTGGATAAAATGATGCTTTGGGCGGACAGGATTCAAAGAGGAGTTGAATCCGCGAGAAAGACGAAGAACTGGCTGCTAGGGAAACCTGGCATGATCTTTGCAATATTCATGCTCATTTTGGCTGTCATTCTTCACCGGTTAGGCTTCATTGGTGGCTAG 1746 0.4238 MFNGMMDPDLMRIAQEQMSRMSPAELARIQQQMMSNPELMRMASESMKNMSSEDFKLAAEQLKHTRPEEMAEIGEKMANASPEEVAAMRSRVDAQIKYQLSAAEMLKKQGNDLHNQGRYNDALKKYILAKENIKEVPSFQSRKLLLACSLNLMSCYLKTRQYNECVKEGSEVLAYDAKNLKALYRRGQAYKELGLLKDAVSDLSMALEVSPDDDTIAELLRDAKEKLAMDGGEHAPGRLVIEEITENVPSGSSSLEQTVVQPKKSGDSSKSYRTANNGNPKTNADSLDALKKDPEAVRSFQNFISNADPDMLASLNAGQFKDVSPDMIKTTSDMVSKMSPEELQRMLDMASSFQGDNPFFRGGSPDSSFNPGSMPPNVTPDMFKAASDMMSKMPADELKRMFEMASSLKGKESTPLAAAVDENERNVSRSNLPSSSTNGTTAFGESSSHNVFSNMRNASQSNFPSSSTDLQEQMRNQMKDPAMRKMFSSMVKNMSPEMMANMGEQFGVKLSPGEAAKAHQAMSSLSPESLDKMMLWADRIQRGVESARKTKNWLLGKPGMIFAIFMLILAVILHRLGFIGG* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2533 581 MobiDBLite consensus disorder prediction 409 449 - -
Gso6g2533 581 MobiDBLite consensus disorder prediction 248 287 - -
Gso6g2533 581 Gene3D Tetratricopeptide repeat domain 89 231 IPR011990 GO:0005515
Gso6g2533 581 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Gso6g2533 581 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 58 580 - -
Gso6g2533 581 SUPERFAMILY TPR-like 96 226 IPR011990 GO:0005515
Gso6g2533 581 MobiDBLite consensus disorder prediction 248 284 - -
Gso6g2533 581 PANTHER OUTER ENVELOPE PROTEIN 61 58 580 - -
Gso6g2533 581 SMART tpr_5 103 136 IPR019734 GO:0005515
Gso6g2533 581 SMART tpr_5 180 213 IPR019734 GO:0005515
Gso6g2533 581 SMART tpr_5 146 179 IPR019734 GO:0005515
Gso6g2533 581 MobiDBLite consensus disorder prediction 424 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2533 Gso-Chr6 47063491 47068739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2533 93 227 Calmodulin-binding Proteins AT5G48570 34.752 6.78e-16 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2533 - - gmx:100800315 1126.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0788 12 8215738 8220679 Gso6g2533 6 47063491 47068739 GST