Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2528 ATGGTTAGAGGTGGTGGACTCCAATCCATGGATTCAGATCCAATTGGGAGCTTCTTCCTCCACAAGCCAATTGTTCTCAACTCTTTCCCAGCTGAAGACACAAACAACAAGTGGAAAAAACATAGTCTCCACCACAACATGGATGCCACAGCTAGCAATACCAAAGATAACACCATCCCCTTTCAAGTCAGCCTTAGATGTTCTCCAAACAATCATGATGATGCCTCTTCACCACCATCTCTCCACAACAACAGAACCGAGATGGACTTATTCTCCGACAAGAATAGTACCAAAGATGATGACAACAACAACAACAAGGTTGATGCTTCTGCCTCTCTCCCCGACAATGATCATCATTCCACCACTCCACCCACGTTGGAATTCAAACTAAACACTGGTGGTCTAAATCTTCTTACTACCAACACTAACAGTGATCAATCTATGGTGGATGATGAGATATCACCCAATTCAGAAGACAAAAGAGCTAAGAATGAGATGGCTGTTCTTCAAGCTGATCTTGAAAGAATGAAGAGGGAGAATCAAAAGTTGAGGGACTCGCTTGATGAGGTTACCACCAATTACAGCGCGCTTCAGATGCATTTTATGAATCTGATGCAAGAGCGAAAGGGAGAGGAAGGTGAAGAAGAACAAGAAGAAGTGTATGGTGGAGAGAAGAAGCAGCAATTAGGTGAGAGTGGTGGTGATGGAATATTAGTTCCAAGGCAGTTTATGGATCTTGGGTTGGCTGCTAATAATGGTACTAGCACTGGTATTGAACCCTCTTCTTCATCAGGAGGAAGAAGCCAAGATCGATCAAGATCACCCAACGTAGAAGTGGCTTCCAAGGAATTAGGGACAAATGATGAAGAAGAGAAGAAAGAGTATGGTAGAGGGATAGAGAGAGAGGATGATAGTCCCTCAGGGCATGCTCATAAAGTTCCAAGGTTCAGTCCTCCAAAGGATAATAATAATAATAGTGTTGAGGCTGAGGCTACTATGAGGAAGGCAAGAGTTTCTGTTAGAGCTCGATCAGAGACACCCATGATTGCTGATGGGTGTCAATGGAGAAAGTATGGGCAGAAAATGGCCAAAGGAAACCCATGTCCTAGAGCTTATTATAGGTGTAGCATGGCATCGGCTTGCCCAGTTAGAAAACAGGTACAAAGGTGTGCTGAAGATAGAACAGTCCTTATCACAACCTATGAAGGAAATCACAACCACCCTTTGCCTCCAACAGCCATGGCAATGGCACAAACCACATCCTCAGCAGCAAGAATGTTGCTTTCTGGATCAATGTCAAGTGCTGACAGCATAATGAATGCAAACTTCCTCACAGGGACACTCCTTCCTTGCTCTTCAAGCATGGCCACTATCTCAGCATCTGCTCCATTCCCAACTGTTACATTAGACCTAACTCATTCTCCAAACCCTCTACAGTTCCCAAGGCAGCAGCATCCAAACCAGTTGCAGATTGGTGTCCCTCAGAATAATTTTGCAAACTCCCCGGCAGCATCTTTACTGCCTCAGATATTTGGACAAGCACTGTATAACAACCAATCAAAGTTTTCTGGCCTACAAATGTCATCATCACATTATGATGCAGACCCTTCTTCACAATTTGGTAATAACCAATTACCACCTCATCAGGTTGTTCCACCACACCTTGCTGACACAGTTGGTGCTGCCATTGCTACTGACCCGAATTTCACTGCAGCATTGGCAGCAGCTATCACTTCCATTATTGGTGGTGCTCCGCTACAACACAGCAACAGTAGTAATAATAATAATAGTAACAGTAACAATAAAGGCAACATGACAGCCAACAACAGCAACAATGGCAATGGCAATGTCGCCAGTAGTAGCAACAACAACTGCAACAACGGAAAGCAATAA 1893 0.44 MVRGGGLQSMDSDPIGSFFLHKPIVLNSFPAEDTNNKWKKHSLHHNMDATASNTKDNTIPFQVSLRCSPNNHDDASSPPSLHNNRTEMDLFSDKNSTKDDDNNNNKVDASASLPDNDHHSTTPPTLEFKLNTGGLNLLTTNTNSDQSMVDDEISPNSEDKRAKNEMAVLQADLERMKRENQKLRDSLDEVTTNYSALQMHFMNLMQERKGEEGEEEQEEVYGGEKKQQLGESGGDGILVPRQFMDLGLAANNGTSTGIEPSSSSGGRSQDRSRSPNVEVASKELGTNDEEEKKEYGRGIEREDDSPSGHAHKVPRFSPPKDNNNNSVEAEATMRKARVSVRARSETPMIADGCQWRKYGQKMAKGNPCPRAYYRCSMASACPVRKQVQRCAEDRTVLITTYEGNHNHPLPPTAMAMAQTTSSAARMLLSGSMSSADSIMNANFLTGTLLPCSSSMATISASAPFPTVTLDLTHSPNPLQFPRQQHPNQLQIGVPQNNFANSPAASLLPQIFGQALYNNQSKFSGLQMSSSHYDADPSSQFGNNQLPPHQVVPPHLADTVGAAIATDPNFTAALAAAITSIIGGAPLQHSNSSNNNNSNSNNKGNMTANNSNNGNGNVASSSNNNCNNGKQ* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2528 630 MobiDBLite consensus disorder prediction 87 105 - -
Gso6g2528 630 MobiDBLite consensus disorder prediction 63 86 - -
Gso6g2528 630 PANTHER OS05G0567200 PROTEIN 55 611 - -
Gso6g2528 630 SUPERFAMILY WRKY DNA-binding domain 342 410 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso6g2528 630 MobiDBLite consensus disorder prediction 106 151 - -
Gso6g2528 630 Gene3D WRKY domain 334 411 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso6g2528 630 MobiDBLite consensus disorder prediction 283 316 - -
Gso6g2528 630 ProSiteProfiles WRKY domain profile. 344 410 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso6g2528 630 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 55 611 IPR044810 GO:0003700
Gso6g2528 630 MobiDBLite consensus disorder prediction 63 161 - -
Gso6g2528 630 SMART WRKY_cls 349 409 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso6g2528 630 MobiDBLite consensus disorder prediction 588 630 - -
Gso6g2528 630 MobiDBLite consensus disorder prediction 526 546 - -
Gso6g2528 630 MobiDBLite consensus disorder prediction 526 551 - -
Gso6g2528 630 MobiDBLite consensus disorder prediction 207 326 - -
Gso6g2528 630 Coils Coil 159 193 - -
Gso6g2528 630 Pfam WRKY DNA -binding domain 351 408 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso6g2528 630 MobiDBLite consensus disorder prediction 248 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2528 Gso-Chr6 47012966 47016470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2528 61 596 WRKY Transcription Factor Family AT1G62300 47.378 9.60e-126 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso6g2528 WRKY 2.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2528 - - gsj:114417328 1104.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0796 12 8313142 8316672 Gso6g2528 6 47012966 47016470 GST
Gso11g3239 11 48177242 48180155 Gso6g2528 6 47012966 47016470 PCT
Gso6g2528 6 47012966 47016470 Gso11g3239 11 48177242 48180155 PCT