Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2487 ATGGGTAGCCAGAGTTACTTCAAGGCTTTGATTATTTGCCTTATAGCACTAATTGGATCAACTCAAGCTCAATTGCAGCTTGGTTTCTATGCCAAAAGTTGTCCAAAGGCTGAGCAAATAATTCTGAAGTACGTTGTTGAGCATATCCACAATGCTCCATCACTAGCAGCTGCTCTCATAAGATTGCACTTCCATGATTGTTTTGTCAATGGTTGTGATGGATCAGTGCTTGTGGACTCAACACCAGGGAATCAAGCTGAAAAGGACGCTATTCCAAATCTTACACTCCGAGGCTTTGGCTTCATTGAAGCAATAAAGAGGCTTGTTGAAGCTGAATGCCCTGGTGTAGTCTCTTGTGCTGATATCTTGGCTTTGACTGCCAGAGACTCTATTCATGCCACTGGTGGACCCTATTGGAATGTTCCAACAGGACGAAGGGATGGGTTCATCTCTAGAGCAGCAGATCCGTTACGCAGCCTTCCTGCTCCTTTTCACAACCTCACTACCCAACTAACACTCTTTGGCAATGTTGGACTTGATGCAAATGACCTTGTCTTGCTTGTTGGTGCTCACACAATTGGTATTGCCCATTGTTCATCAATTTCAACCCGTCTATACAATTTTACAGGCAAGGGTGACACAGACCCAACAATAGATAGTGGATATGCAAAAAATCTCAAGACCTTCAAGTGTAAGAACATTAATGATAACTCACTTATTGAGATGGACCCTGGAAGTCGTGATACATTTGATCTTGGATATTACAAACAAGTGGTTAAGAGAAGGGGTTTGTTCCAATCAGATGCTGAATTGCTTACTAGTCCTATCACAAGGTCTATTATCGCTAGTCAACTTCAGTCAACTCAAGGATTCTTTGCGGAATTTGCCAAGTCTATGGAGAAAATGGGACGAATTAATGTCAAGCTTGGAGCTGAAGGAGAGATAAGGAAACATTGTGCACGAGTTAATAACTAA 975 0.4215 MGSQSYFKALIICLIALIGSTQAQLQLGFYAKSCPKAEQIILKYVVEHIHNAPSLAAALIRLHFHDCFVNGCDGSVLVDSTPGNQAEKDAIPNLTLRGFGFIEAIKRLVEAECPGVVSCADILALTARDSIHATGGPYWNVPTGRRDGFISRAADPLRSLPAPFHNLTTQLTLFGNVGLDANDLVLLVGAHTIGIAHCSSISTRLYNFTGKGDTDPTIDSGYAKNLKTFKCKNINDNSLIEMDPGSRDTFDLGYYKQVVKRRGLFQSDAELLTSPITRSIIASQLQSTQGFFAEFAKSMEKMGRINVKLGAEGEIRKHCARVNN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2487 324 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso6g2487 324 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso6g2487 324 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso6g2487 324 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso6g2487 324 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso6g2487 324 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso6g2487 324 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso6g2487 324 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso6g2487 324 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso6g2487 324 Gene3D Peroxidase, domain 2 161 302 - -
Gso6g2487 324 ProSiteProfiles Plant heme peroxidase family profile. 24 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso6g2487 324 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso6g2487 324 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso6g2487 324 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso6g2487 324 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso6g2487 324 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso6g2487 324 PANTHER PEROXIDASE 3 323 - -
Gso6g2487 324 PANTHER PEROXIDASE 25-RELATED 3 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso6g2487 324 SUPERFAMILY Heme-dependent peroxidases 24 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso6g2487 324 Gene3D - 28 323 - -
Gso6g2487 324 CDD secretory_peroxidase 24 322 IPR033905 GO:0004601|GO:0042744
Gso6g2487 324 Pfam Peroxidase 47 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso6g2487 324 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Gso6g2487 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2487 Gso-Chr6 46630548 46633615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2487 14 323 Peroxidase AT1G05260 63.462 6.55e-149 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2487 K00430 - gmx:547504 649.818