Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2481 ATGGGAGATGGAGGCGTGGCGTGTATACCTCTGCAGCAGCAGCATGTTATTGAGCGGTTGCCGAATGCGGCGGCGGAGAAGGCGCTTAGTGGGAACGGGTTCGGTTCTGGGCTGCTCAAGGCAGCTGGCAAGAGGAAGAAGAAGAAGGTGAAGGTGAAGAAGAAAGTGGCGCCCGCGGCAAAGAAGGTGGTAAACAGTGAATTGGCAGTGGAGGGAGTAGGCAGCAGGGGTGGGAATGATGTTGAGAGTGGGGGAGTGTGTGGGGAGATGGATGAAGTGGAAGAGGGTGAACTGGGGACCTTGGGGTGTGAGCTGGAGAATGGAGAGTTTGTGCCGCCGGAGAAGCCGGTGATGCTGACACGGAGAAGTGAAATTGAGAATGGGGAGATTGCCAGTGAGAGATGGAAGAAAGGGGAGGTGGAGAGGGGGGTGTTTGTTTCTGGAAAATGGAGAAAGGAGGAGGATGTGGAGAAAGGGGAGATAGTTCCTGAGAAGGGTAGGAAAGGAGAAACTGAGAAATGGGAATATGGGTCGTGGAGAGGTGGAATGAAGAATGATATTGAGAAGGGAGAATTCATTCAAGATAGGTGGCATAGGGGAGACATGGGGAGGGATGATTATGGCTGTGCTAGAATCTGCAGGTACCCGCCAGGTAGGGATAAAGGGTGGAAAAATGAACGGGAGCGTACACCACCTTCTGGGAGATATTATATAGGTGATGAGTATTTCAGGAAGAAGGAATTGAATAGAAGTGGAAGTCAGCATGCTAAAAGTGCTCCCAGGTGGGATAGTGGACAAGAGAGAAATATAAGGATCAGTTCGAAGATTGTGGATGAGGAGAAAAATGAACACAGTAATAGTAGGACCCATATGCGGGATTACTCTTCTGGAAATCGGTTGAAGAGGCATGGTAATGAGTCAGAAGGCTGTGAGTGGAACTATGGAGATTATGCCGGTTTAAAAAGTCGAAGGCTTTCTGATGATAGCCCACGTCATGCTTATTCTGAGCACTATTCTCGCCCCTCTGTGGAAAGATCTTATAGAAATAGTTCTTCCAAATCATCAGCAGACAAGTATTCTTCCAGGCACCACGAGTCTTTGCCTACCAGATCAGTTTATGACAAGCATGGACGCAGCCCTGGTCATTCTGAGCGATCCCCACATGACCGAGCCAGGTATTATGATCATAAAGATCGCACTCCAGTGCGTCCTTCACCCTACAGTCGTGACAGATCTCCATATAGCCGTGAGAAATCCCCACATGGTCGGGAGAGATCCCCATATAACAGGAATTGGGATAGAAGTCGTCACCATGATCATAAAATGAGAAGTCCTACTCATGCTGAGCGGTCCCCACAAGATCGAGGTCGACATCAAGATAGGAGGGACCTCACTCCAAATTTAATGGAGCAATCCCCACATGATCGAACTAAGTCAAACATTCATCGAGAAGTAAGTAGTAAAACCTTATCAAGTGGAAAACATAACTCACAACATAGTTGTAAGGATTCTGAAGATAAGCACATCCAACAGGAGGCAAATCTTTCTGATGTTGAATCTCATGGTGAAAGAAATGTGCATAATGGCAATAAGTCTATTGAGAAAGATGTCTGCAGTGAACCTGAAAAGGAACAACAGTCCTCTAGTCCGACTGTAAGCTGCAAAGACTCTCCTTGCTTGGAGCCATCTCCTGAGGAGCTACCTTCTATGGAAGAAGATATGGACATATGTGATACTCCTCCACATGTCCCTGTGGTGATGGATTCGTCATCTGGGAAATGGTTTTACCTTGATTATAACGGTGTAGAACATGGGCCTTCTAAGTTGTCTGACATCAAGGTCCTTGTGGATGATGGCGTACTTATGTCAGATCACTTTATTAAGCACATAGATAGTGACAGGTGGCTAACTGTTGAAAAAGCAGTATCCCCAGTGGCAGCTCCGAGTTTTCCACCAGTTGTGTCAGACACCATAACCCAGTTGGTAAACCCTCCAGAAGCCCCAGGTAATCTGTTGGCTGATACTGGAGATATTCTTCAATCTGGTCCTGAGAATTATCCGGGAATCCCGGCGCCTATTCTGCAGCCAATGTTATGCTCTGAAGACAGTGGGATTGCATCTGAATTGTTGGAGGACCTCCACATTGATGAAAGGGTTGGAGTTCTGTTAGAGGGTTATGATGTCATTCCAGGAAGGGAGTTTGAAGCAATAAAAGAATCTTTGCAAATGGATTTTGAATATGCAAAATGGGAGGGATTGGAGGAGTGTGAAGGTTTTCCTGGCCATGATAGCCTGAGGATGGAACATGATTCAAGAATTGATTCATCTAGAGAACATGAGTCTCAGGTAAGTATACCCTCTGGCAAGGATAATGGATTTACTGTTGGTGTTCCTGGTGACTGGTCTTCTGCTCAATGGTCATGCAAAGGTGGTGACTGGAAGAGGAATGATGATGCCCAAGATAGATTTTGTAATAAAAAACTTGTCCTCAATGATGGGTTTTCACTATGTCAAATGCCTAAATCTGGATGTGAAGATCCTCGTTGGACTCGAAAAGATGACTTGTATTATCCTTCTCATAGCAGGAGGCTTGATCTTCCTCTTTGGGCTTTTTGTACTGATGAGAGGGTTGATTGCAGTACTGTGAGCAAACCAGTTCAAACCAAGCTTGCTTCTGTTAGGGGAGTGAAAGGAAATATTCTTTCAGTGGTAAGGATAAATGCATGTGTAGTCAAGGACCAGGGATCATTGGTCTCTGAGGCATGCCACAAGACCCAAGGCAAGGATAGATATCATTCAAGGTCAACTCGGTCTTTCTCTTCAACCAGTGATAGCAAGAGATCATCAACTGAAGAAGATTCTCAGTCAAAAGCTTCTAATGATCAAGGTTCTCTAGGCTCTTGCAGGAGCATGGAATTCATTAATATTCCTAAAGACCATAATTGTACTGTCCATGACTTGCAATTACATTTAGGCGACTGGTATTATCTTGATGGTTCTGGGCGTGAAAGAGGGCCTTCATCATTTTCAGAGCTACAGCATTTAGTAGACCAAGGAATTGTAAAAAATTATAGCAGTGTGTTCAGGAAATGTGATAAACTCTGGGTTCCTGTTACGTCTTCTGCTGAAACATATGATGAAGATGTCAATCTAAGAAGTTATCAAGAAAGTAGTACAGTGTCTGGTGAATGTTCTGGACTACCATCAAAGCAAATTCATGGTGCTTCATTTGGTGAACACGACTCAAAGTCAAATTTGTTTAACAGCTTATTCCCTCAGTTTGTTGGTTATACTCGTGGGAAGCTACATGAATTAGTAATGAGATCATATAAGAGCCGGGAGTTTGCTGCTGTTATAAATGAGGTTTTAGATCCCTGGATCAATGCAAGACAGCCAAAGAAAGAAATTGAGAAACAAATATATTGGAAATCTGAAGGTGATGGACATGCTTCCAAAAGAGCTAGGATGCTGGCTGATTATAGTGAAGAAGATAGTGATTTTGAAGATGGCAGCCTGACAAATGGGAAAGATGAATCCACATTTGAGGCTTTATGTGGTGATGCTACATTCTCCGGGGAAGGAAGTGGCATTACTGATCCCAAGGTTGGAAGCTGGGGTTTATTAGATGGTCGTATGTTGGCACGAGTCTTCCACTGCTTAAGGTCTGATTTGAAATCACTTGCCTTTGCATCAATGACTTGCAAGCATTGGAGAGCTACTGTAAGGTTTTACAAAAAGGTCTCAAGGCATGCTAATTTGTCATCCTTGGGTCATTCTTGCACTGATTCCATAATGTGGAACATCTTGAATGCCTATGAAAAAGACAAGATTGAATCCATTGTTCTAATTGGTTGCACCAATATTACTGCTGGCATGCTAGAGAAAATTCTTCTTTCATTTCCTGGTTTATCTACAGTAGACATTAGAGGGTGCAGCCAGTTTGGAGAGCTGACTCCTAAATTTACCAATGTGAAATGGATCAAGAGCCAGAGTTCACACATAACCAAAATTGCAGCGGAATCACATAAAATCAGAAGCCTTAAACAAACTGCTGAGCAAACTTCATCTATTTCTAAGGTCAGCAGTTTTAGTATTAGGGATGATTTTGGTGAGCTGAAGGACTATTTTGACAGTGTGGATAAGAGAGACTCAGCGAAGCAATTATTCCGTCAAAACTTGTACAAGCGGTCAAAATTATATGATGCTCGGAAGTCCTCGTCTATTCTCTCTAGAGATGCTCGAACAAGACGATGGTCAATTAAGAAATCTGAAAGTGGTTACAAGAGGATGGAACAATTTCTTGCTTCAAGTTTGAGGGAAATTATGAAGGCAAACTCCTGCGACTTTTTTATGCCCAAGGTTGCAGAAATTGAGGCTAAAATGAAAAATGGTTATTACAGTGGGCATGGGTTGAGCTATGTCAAGGAGGACATCAGTAGAATGTGCCGGGATGCAATAAAAACAAAGAATCGGGGTGATGCTGGTAATATGAATCATGTTATCACATTATTTATTCAGCTTGCAACATGGTTGGAGGAGAATTCCAAGTATGTGAATAGCAGAGATGCACTAGTGAAGTTGTGGGGAAATAACCCACCATCATCTTTATGTTCTACTTCCTCTAAGTACAAGAAGAATAGATTGGTATCTGAGAGGAAGCATAGGAGTAATGAAACACATGGTGGTTTGGATAATGGAGAATATGCTTCTGATAGAGAAATCAGGAGGCGTTTATCAAAGTTGAATAAAAAATCTTTCGACTCGGAGAGTGAGACATCTGATGACTTTGATAGATCTTCTGAAGATGGCAAGAGTGATAGTGATACTACAACCACTGATATTGAAAGCGACCAAGATGTCCATTCAGAAAGTCGAATTGGGGACTCGAGGGGAGATGTGTATTTCACACCTGATGATGGGTTGGATTTCATTACTGATGAGCGTGAATGGGGGGCTCGCATGACGAAAGCAAGTTTGGTTCCTCCTGTTACTCGGAAGTATGATGTCATTGATCAATATATCATTGTAGCTGATGAAGAGGATGTGCGAAGGAAGATGCGGGTTTCATTACCAGATGGCTATGCAGAGAAGCTGAGTGCGCAAAAGAATGGCATTGATGAGTCTGACATGGAACTGCCTGAAGTCAAGGATTACAAACCTAGAAAACAGCTTGAAAATGAGGTTGTTGAGCAAGAAGTTTATGGAATTGATCCCTATACCCACAATCTCTTACTAGATTCTATGCCGAAGGAGTTGGATTGGTCTCTACAAGAGAAGCATTTGTTTGTAGAAGACAAGCTCCTTCGGATGTTGAATAAGCAGGTTAATCATTTTACTGGAACTGGAAACACTCCAATGAGCTACCCTTTGCAGCCTGCTATTGAAGAAATTGAAAGGTATGCAGAGGAGCAGTGCGATGTGAGAACAGTAAGAATGTGTCAAGGTATCTTAAAAGCCATAGCAAGTCGTCCGGATGACAAATATGTAGCTTATAGAAAGGGGCTTGGTGTTGTTTGCAACAAGGAAGAAGGCTTTGGTGAAGATGATTTTGTTGTTGAGTTTTTAGGAGAGGTGTATCCTGTGTGGAAGTGGTTTGAGAAACAAGATGGGATTCGATCTCTGCAGAAGAATAGTAATGATCCTGCACCAGAGTTCTATAACATCTACCTTGAAAGGCCAAAGGGTGACGCTTATGGGTACGACTTAGTTGTCGTTGATGCCATGCATAAGGCTAACTATGCCAGTCGGATATGTCATTCATGCCGACCGAATTGTGAAGCAAAAGTTACTGCTGTTGATGGTCATTATCAAATTGGTATTTATAGTGTTCGTGAAATTCAACATGGCGAGGAGATCACTTTTGATTACAATTCTGTTACAGAGAGCAAGGAGGAATATGAAGCTTCAGTTTGTTTGTGTGGAAGCCAAGTTTGCCGTGGGAGCTATCTGAATCTGACCGGCGAAGGGGCTTTCGAAAAGGTACTGAAGGAGTGGCATGGAATTCTTGATCGTCATTATTTGATGCTAGAAGCTTGTGAATTAAACTCTGTTTCTGAAGAGGACTATAATGACCTGGGAAGAGCTGGTTTAGGCAGCTGTTTGCTTGGAGGCCTTCCAGATTGGCTAGTTTCCTATGCAGCTCGCCTTGTGAGATTTATCAATTTTGAACGAACAAAACTTCCTGAGGAAATTTTAAAGCATAATCTTGAAGAGAAAAGAAAATATTTTTCAGATATCTGTCTTGAAGTTGAAAGGAGTGATGCAGAGGTTCAGGCTGAAGGTGTATACAATCAGAGGCTTCAAAATCTTGCTGTCACTCTTGATAAGGTAAGATATGTTATGCGATGTATTTTTGGTGATCCACTGAAAGCTCCACCTCCTCTTGAGAAGCTCAGTCCTGAAGCAGTTGTTTCCTTCCTCTGGAAAGGAGAGGATTCATTTGTTGAAGAGCTTCTTCAGTGCCTGGCCCCTCATGTTGAAGAGTCTACCTTGAATGATCTCAAGACCAAAATTCATGCTCGTGATCCTTCAAGTTCTGGAGATATTCAAAAGGCGGTTCAAAAATCTCTTTTGTGGTTGAGGGATGAGGTTCGAAACCTTCCTTGTACATACAAATGTCGGCATGATGCTGCTGCTGACTTAATTCATATTTATGCTTATACCAAGTACTTCTTTAGAATACAGGATTATCAAACTATTACTTCGCCACCTGTCTATATTAGTCCACTTGACTTAGGTCCTAAGTATGCTGACAAATTGGGAGCAGGATTTCAGGAGTATCGAAAGATATATGGTGAAAATTATTGTTTAGGGCAACTGGTTTTTTGGCATAATCAGAGTAATGCGGAGCCAGATTGTACCCTGGCTAGAATAAGCAGGGGTTGTTTGTCATTACCAGACATCAGTTCCTTTTATGCCAAAGCTCAGAAGCCTTCACGACATCGTGTTTATGGTCCAAGGACTGTCAGATCTATGCTGGCAAGAATGGAGAAGCAGCCCCAGAAACCTTGGCCCAAAGACCGGATTTGGTCATTCAAAAATTCTCCGAAATTTTTTGGTAGCCCAATGTTAGACGCTGTAATTAATAACTCTCCACTTGACAGAGAGATGGTTCATTGGTTGAAGCACAGACCTGCAATATTCCAGGCCATGTGGGACCAGTGA 7164 0.4288 MGDGGVACIPLQQQHVIERLPNAAAEKALSGNGFGSGLLKAAGKRKKKKVKVKKKVAPAAKKVVNSELAVEGVGSRGGNDVESGGVCGEMDEVEEGELGTLGCELENGEFVPPEKPVMLTRRSEIENGEIASERWKKGEVERGVFVSGKWRKEEDVEKGEIVPEKGRKGETEKWEYGSWRGGMKNDIEKGEFIQDRWHRGDMGRDDYGCARICRYPPGRDKGWKNERERTPPSGRYYIGDEYFRKKELNRSGSQHAKSAPRWDSGQERNIRISSKIVDEEKNEHSNSRTHMRDYSSGNRLKRHGNESEGCEWNYGDYAGLKSRRLSDDSPRHAYSEHYSRPSVERSYRNSSSKSSADKYSSRHHESLPTRSVYDKHGRSPGHSERSPHDRARYYDHKDRTPVRPSPYSRDRSPYSREKSPHGRERSPYNRNWDRSRHHDHKMRSPTHAERSPQDRGRHQDRRDLTPNLMEQSPHDRTKSNIHREVSSKTLSSGKHNSQHSCKDSEDKHIQQEANLSDVESHGERNVHNGNKSIEKDVCSEPEKEQQSSSPTVSCKDSPCLEPSPEELPSMEEDMDICDTPPHVPVVMDSSSGKWFYLDYNGVEHGPSKLSDIKVLVDDGVLMSDHFIKHIDSDRWLTVEKAVSPVAAPSFPPVVSDTITQLVNPPEAPGNLLADTGDILQSGPENYPGIPAPILQPMLCSEDSGIASELLEDLHIDERVGVLLEGYDVIPGREFEAIKESLQMDFEYAKWEGLEECEGFPGHDSLRMEHDSRIDSSREHESQVSIPSGKDNGFTVGVPGDWSSAQWSCKGGDWKRNDDAQDRFCNKKLVLNDGFSLCQMPKSGCEDPRWTRKDDLYYPSHSRRLDLPLWAFCTDERVDCSTVSKPVQTKLASVRGVKGNILSVVRINACVVKDQGSLVSEACHKTQGKDRYHSRSTRSFSSTSDSKRSSTEEDSQSKASNDQGSLGSCRSMEFINIPKDHNCTVHDLQLHLGDWYYLDGSGRERGPSSFSELQHLVDQGIVKNYSSVFRKCDKLWVPVTSSAETYDEDVNLRSYQESSTVSGECSGLPSKQIHGASFGEHDSKSNLFNSLFPQFVGYTRGKLHELVMRSYKSREFAAVINEVLDPWINARQPKKEIEKQIYWKSEGDGHASKRARMLADYSEEDSDFEDGSLTNGKDESTFEALCGDATFSGEGSGITDPKVGSWGLLDGRMLARVFHCLRSDLKSLAFASMTCKHWRATVRFYKKVSRHANLSSLGHSCTDSIMWNILNAYEKDKIESIVLIGCTNITAGMLEKILLSFPGLSTVDIRGCSQFGELTPKFTNVKWIKSQSSHITKIAAESHKIRSLKQTAEQTSSISKVSSFSIRDDFGELKDYFDSVDKRDSAKQLFRQNLYKRSKLYDARKSSSILSRDARTRRWSIKKSESGYKRMEQFLASSLREIMKANSCDFFMPKVAEIEAKMKNGYYSGHGLSYVKEDISRMCRDAIKTKNRGDAGNMNHVITLFIQLATWLEENSKYVNSRDALVKLWGNNPPSSLCSTSSKYKKNRLVSERKHRSNETHGGLDNGEYASDREIRRRLSKLNKKSFDSESETSDDFDRSSEDGKSDSDTTTTDIESDQDVHSESRIGDSRGDVYFTPDDGLDFITDEREWGARMTKASLVPPVTRKYDVIDQYIIVADEEDVRRKMRVSLPDGYAEKLSAQKNGIDESDMELPEVKDYKPRKQLENEVVEQEVYGIDPYTHNLLLDSMPKELDWSLQEKHLFVEDKLLRMLNKQVNHFTGTGNTPMSYPLQPAIEEIERYAEEQCDVRTVRMCQGILKAIASRPDDKYVAYRKGLGVVCNKEEGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNSNDPAPEFYNIYLERPKGDAYGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYSVREIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFEKVLKEWHGILDRHYLMLEACELNSVSEEDYNDLGRAGLGSCLLGGLPDWLVSYAARLVRFINFERTKLPEEILKHNLEEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPLKAPPPLEKLSPEAVVSFLWKGEDSFVEELLQCLAPHVEESTLNDLKTKIHARDPSSSGDIQKAVQKSLLWLRDEVRNLPCTYKCRHDAAADLIHIYAYTKYFFRIQDYQTITSPPVYISPLDLGPKYADKLGAGFQEYRKIYGENYCLGQLVFWHNQSNAEPDCTLARISRGCLSLPDISSFYAKAQKPSRHRVYGPRTVRSMLARMEKQPQKPWPKDRIWSFKNSPKFFGSPMLDAVINNSPLDREMVHWLKHRPAIFQAMWDQ* 2388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2481 2387 MobiDBLite consensus disorder prediction 1551 1569 - -
Gso6g2481 2387 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1968 2387 IPR045606 -
Gso6g2481 2387 MobiDBLite consensus disorder prediction 1583 1633 - -
Gso6g2481 2387 MobiDBLite consensus disorder prediction 1536 1569 - -
Gso6g2481 2387 CDD SET_SETD2-like 1831 1979 - -
Gso6g2481 2387 MobiDBLite consensus disorder prediction 1583 1628 - -
Gso6g2481 2387 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 1 2387 - -
Gso6g2481 2387 MobiDBLite consensus disorder prediction 272 309 - -
Gso6g2481 2387 Pfam SET domain 1900 1957 IPR001214 GO:0005515
Gso6g2481 2387 MobiDBLite consensus disorder prediction 357 483 - -
Gso6g2481 2387 MobiDBLite consensus disorder prediction 498 542 - -
Gso6g2481 2387 MobiDBLite consensus disorder prediction 321 343 - -
Gso6g2481 2387 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 1 2387 - -
Gso6g2481 2387 MobiDBLite consensus disorder prediction 928 964 - -
Gso6g2481 2387 SUPERFAMILY SET domain 1832 1980 IPR046341 -
Gso6g2481 2387 SMART set_7 1823 1963 IPR001214 GO:0005515
Gso6g2481 2387 ProSiteProfiles SET domain profile. 1818 1957 IPR001214 GO:0005515
Gso6g2481 2387 MobiDBLite consensus disorder prediction 767 789 - -
Gso6g2481 2387 Gene3D SET domain 1803 1988 IPR046341 -
Gso6g2481 2387 MobiDBLite consensus disorder prediction 248 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2481 Gso-Chr6 46525629 46545140 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gso6g2481 SET 3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2481 K22748 - gmx:100781921 4717.14