Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2463 ATGGAGTTTGACCTTGAGAACCCATTTGAAAATCTTCACTCTGATGCTGTCTCTTACCTCTTCCTCATTGAATCTGACCACACCCCATCACAGAATCACTCTCAAACTCTTAAAGCCAGAGATCTTGACATCTCTGTCAGAAGAGAACTCATTTCCTTAATCTCACAGTTGTCCTGTGCTCTGGATCCGGTTTTGTCTTACCTTGCTATCAACTATCTGGACCGGTTCCTAGCCAACCAAGGGATTTTGCAACCAAAGCCATGGGCTCTTAGGCTCATTGCTGTCTCTTGCATTTCTCTTGCAGTGAAGATGATGAGAACTGAATACCCTTTCACTGATGTCCAGGCCCTTTTGAATCAAAGTGATGGTGGGATCATCTTTGAGACACAAACAATACAAAGAATGGAAGCACTAATCTTGGGGGCATTACAATGGAGAATGAGATCGATCACCCCATTCTCTTTCGTAGCTTTCTTCATTGCCTTGGTGGGGCTCAAAGACTTGCCAATGGGACAGGTTCTGAAAAACCGTGCCTCTGAAATCATATTCAAGTCACAAAGAGAGATAAGGCTTTGGGGATTCAAGCCATCTATAATTGCTGCATCTGCCCTTCTGTGTGCTTCTCATGAGTTGTTCCCTTTCCAATATCCGTCCTTCTTAAAAGCAATATCCGATTCTTCATATGTAAATAAAGAAAGCGTGGAGCAGTGCTACAAAGTGATACAAGACATAGCCATAGAGGAAGAGTACTCTTCTGCGTTGAATGGGGTTTCAAGCTCAGACACACCGATTAATGTGTTGGACCATCACTTTCTGAGTTCAGAAAGTCAAAAAACCAACGGAATCACCGTTGCGAATACTATTGCTGTTTCTTCTCCTCTGAGGGACCTCAAAAGAAGGAAAATCACTGGCTGTGGATGTGGTGGAAACAATCCAACGATCCACAATTCCCGAATTCAATTCAGCCATGCCAAAGAGAGTGAAAAGTAA 990 0.4323 MEFDLENPFENLHSDAVSYLFLIESDHTPSQNHSQTLKARDLDISVRRELISLISQLSCALDPVLSYLAINYLDRFLANQGILQPKPWALRLIAVSCISLAVKMMRTEYPFTDVQALLNQSDGGIIFETQTIQRMEALILGALQWRMRSITPFSFVAFFIALVGLKDLPMGQVLKNRASEIIFKSQREIRLWGFKPSIIAASALLCASHELFPFQYPSFLKAISDSSYVNKESVEQCYKVIQDIAIEEEYSSALNGVSSSDTPINVLDHHFLSSESQKTNGITVANTIAVSSPLRDLKRRKITGCGCGGNNPTIHNSRIQFSHAKESEK* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2463 329 Pfam Cyclin, C-terminal domain 150 249 IPR004367 -
Gso6g2463 329 CDD CYCLIN 47 140 IPR013763 -
Gso6g2463 329 SUPERFAMILY Cyclin-like 12 147 IPR036915 -
Gso6g2463 329 SMART cyclin_7 48 141 IPR013763 -
Gso6g2463 329 PANTHER CYCLINS 9 281 IPR039361 -
Gso6g2463 329 Gene3D - 20 239 - -
Gso6g2463 329 Pfam Cyclin, N-terminal domain 21 147 IPR006671 -
Gso6g2463 329 SMART Cyclin_C_2 150 263 IPR004367 -
Gso6g2463 329 SUPERFAMILY Cyclin-like 132 246 IPR036915 -
Gso6g2463 329 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 9 281 - -
Gso6g2463 329 Gene3D - 30 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2463 Gso-Chr6 46300764 46303297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2463 1 303 Core Cell Cycle Gene Families AT4G03270 43.438 7.99e-72 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2463 K18812 - gmx:100820404 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0868 12 9663463 9666207 Gso6g2463 6 46300764 46303297 GST
Gso12g1686 12 40490228 40492842 Gso6g2463 6 46300764 46303297 PCT
Gso11g3182 11 47598616 47601247 Gso6g2463 6 46300764 46303297 PCT
Gso6g2463 6 46300764 46303297 Gso12g1686 12 40490228 40492842 PCT
Gso6g2463 6 46300764 46303297 Gso11g3182 11 47598616 47601247 PCT