Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2439 ATGGCGAACGGGTTAGAGAGAGAAAGTGGGTTGACGACGTTGTTCAGCGAGGAGGAGCTGAGAGAGGTGAGTGGGGTTAAGCGTGTTGGGGACTGTGTCGAAGTCACGTGCGGGTGCACGAGCCATAGATACGGTGACGCTGTGGGAAGACTTAGGGTTTTCGTTAATGGGTACCTTGAAATCACTTGCGAATGCACCCCTGGTTGCCAAGAAGACAAGTTGACTCCTTCTGCATTTGAGAAACACTCTGGAAGAGAGACTGCCAGGAAATGGAAGAATAATGTCTGGGTAATTGTTAATGGTGAGAAGGTTCCATTGTGTAAAACAGTGCTGCTCAAATACTACAATCAGGTGTCAAAAGCTGCAAATGGCTCCCATAGATCCCAAAATGGCCGGGCTTGTCACCGTGATGAGTTTGTTCGCTGCACTAGTTGCAATAAAGAGCGTAGGTTTCGTCTGAGGACTAAAGAGGAATGCCGCATTCACCATGATGCTTTAGCAGATGCAAATTGGAAATGTTCTGATCTTCCATATGACAAAATTACGTGTGATGATGAAGAAGAAAGAGCAAGCCGTAGAGTTTACAGGGGATGCACTCGTTCTCCAACATGCAAAGGTTGCACTTCTTGTGTGTGCTTTGGCTGTGATATCTGCCGCTTTTCAGATTGCAGCTGCCAGACTTGTGCTGACTTTACAAACAATGCCAAAGCTTGA 714 0.4678 MANGLERESGLTTLFSEEELREVSGVKRVGDCVEVTCGCTSHRYGDAVGRLRVFVNGYLEITCECTPGCQEDKLTPSAFEKHSGRETARKWKNNVWVIVNGEKVPLCKTVLLKYYNQVSKAANGSHRSQNGRACHRDEFVRCTSCNKERRFRLRTKEECRIHHDALADANWKCSDLPYDKITCDDEEERASRRVYRGCTRSPTCKGCTSCVCFGCDICRFSDCSCQTCADFTNNAKA* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2439 237 ProSiteProfiles SAND domain profile. 18 106 IPR000770 GO:0003677
Gso6g2439 237 PANTHER PROTEIN ULTRAPETALA 1 1 236 - -
Gso6g2439 237 PANTHER PROTEIN ULTRAPETALA 1 1 236 IPR020533 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2439 Gso-Chr6 46078841 46083432 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Gso6g2439 SAND 0.00015 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2439 - - gmx:100815782 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0885 12 9943771 9948196 Gso6g2439 6 46078841 46083432 GST