Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2436 ATGAGGTGGAGATCAATGGGTTGGAAGAGATCTGGTTTGGAGTGGAAGAGGGTGAAGATCTATGAACAACTTCTATTGGTATATTTGTTGATCTGCACAATTCAGACTTCAAGTGCAGCCACTGATCCCACTGATGTTGCTGCAATTAATAGCTTATACATTGCACTGGGATCCCCTGTTTTGCCTGGGTGGGTTGCTAGTGGAGGAGATCCATGTGGAGAAGGTTGGCAAGGCATTCTGTGTAATGGATCATTCATACAAAAAATAGTTCTAAATGGTGCAAATTTGGGAGGAGAACTGGGAGATAAACTGTCAACTTTTGTTTCAATCTCAGTAATTGATCTAAGCAGCAACAACATTGGAGGAAATATTCCATCCAGTTTGCCAGTTACCTTGAGAAACTTTTTTCTTGCAGCCAACCAGTTCACTGGAAGTATTCCGGCATCTTTATCCACTTTGACTGGACTGACAGACATGTCTCTCAACGAAAACTTTTTAACTGGAGAAATACCAGATGCTTTTCAGTCACTTACGCAATTGATCAATCTAGATTTATCTCAAAATAATTTGAGTGGGAAATTGCCTCCTTCTATGGATAACTTGTTGGCTCTGACCACCCTACGCTTACAGAACAATCAACTGTCTGGGACACTTGATGTTTTACAAGACCTTCCTCTGAAAGATTTGAATGTTGAGAACAACCAGTTTGCTGGCCCAATACCTCCAAAGTTGCTAAGCATCCCTGCCTTCAGACAAGCTGGAAACCCATTTAATGTTAGTGGTAGTACTACAACTCCTGCTTCTTCTCCTCGCTCCCCAGCAATAGCACCACCAGGAACTCCGGTTTCTGGGACACCACCATCTTCAGGCCGTGTACCTACTAAACAGGCTGATGGACCAACTGCAGCAAATGAATCACATACTGGGAAATCCAAAAAATCCACAAAAAGGGTGGTTTGGATATCTATTGCTAGTGTGTTGGGATTCATTATTTTGTTACTAGGATTTATTCTCTTTATTCCAAGGTGTAGCAGAAGAGAACGGGATGACAGAAGATCCAAGCGACATCAAATTGGTGCATATGGAGGTGAAAGACAAAGTGCTAGGGATTTAGTCCAACCACGTAGTCAAATGGAAAAAGTACCAGTAGGGGATGTTCCAAAGCCAAAAGAGGGTCATCATGCTGAGAGCCGGAGAACTTGGGTTAATCCAAATCCACAGGGTGAGCAAGAGAAGGATGTGCATAGAATGGAAACAATACCAAAGCCAAGACAGCATGAGATAGATATGAATACACTAGAAGTATATTCAATGCCTCCTCCTCCTCCTCCTCCCCCTCCACCCCCACCCCCACCCCCACCACCTCCCCCGCCTCCACCCCCGCCTCCTCCTCCTCCTCCTCCTCCTCCAACTGAGAAGGTGATTGTTGAGCCAGCCTCATCCAGTAGAGGGACTAATGTCAATCCACCCATTAGAAGTTCAGTTCCTCCTCCCACTTTTGCAAAATTTTTTGCCATTGCATCCCTTCAACAGTATACAAATAGCTTTTCTGAAGAAAATCTTATAGGAGGAGGCATGCTGGGTAATGTGTATAGAGCAGAGCTTCCTAATGGCCAGTTACTTGCTGTAAAGAAACTGGACAAGAGAGCCTCCGCACACCAGAAGGATGATGAATTTCTTAAATTGATAAATAGTATTGACAGAATACGGCATGCAAATGTTGTTGAACTTGTTGGATACTGTTCAGAGCATGGTCAAAGACTTCTGATCTATGAGTACTGCAGTAATGGATCACTGTTTGATGCACTCCACTCAGATGATGACTTCAAAACAAGACTCTCGTGGAATTCTCGTATTCGGATATCACTTGGGGCAGCCAGAGCCTTAGAATATCTGCATGAGCAATGTCAGCCACCTGTAGTACATAGAAATTTGAAGTCTGCCAATATTCTCCTTGATGATGATCTATCCGTGCGGGTCTCTGATTGTGGTTTAGCTCCATTAATAGCTTCAGGATCTGTCAGTCAGCTCTCGGGGAACCTGTTAACTGCTTATGGCTATGGAGCTCCTGAATTTGAGTCTGGAATTTACACATATCAAAGTGATGTGTACAGCTTTGGAGTGATTATGTTAGAACTTTTGACTGGCCGTCCATCGCACGATAGGACACGACCACGAGGGGAGCAATTTCTGGTCAGATGGGCAGTTCCTCAACTACATGATATCGATGCGTTATCAAGGATGGTTGATCCTTCATTAAATGGAAATTACCCTGCAAAATCATTGTCAAATTTTGCAGACATTATCTCTAGATGCCTTCAGTCTGAGCCAGAATTTAGGCCAGCAATGTCCGAGGTCGTCCTATACTTGCTAAATATGATAAGGAAGGAGTCTCAGCAAACTGAATCAAATGAAAAATGA 2421 0.4349 MRWRSMGWKRSGLEWKRVKIYEQLLLVYLLICTIQTSSAATDPTDVAAINSLYIALGSPVLPGWVASGGDPCGEGWQGILCNGSFIQKIVLNGANLGGELGDKLSTFVSISVIDLSSNNIGGNIPSSLPVTLRNFFLAANQFTGSIPASLSTLTGLTDMSLNENFLTGEIPDAFQSLTQLINLDLSQNNLSGKLPPSMDNLLALTTLRLQNNQLSGTLDVLQDLPLKDLNVENNQFAGPIPPKLLSIPAFRQAGNPFNVSGSTTTPASSPRSPAIAPPGTPVSGTPPSSGRVPTKQADGPTAANESHTGKSKKSTKRVVWISIASVLGFIILLLGFILFIPRCSRRERDDRRSKRHQIGAYGGERQSARDLVQPRSQMEKVPVGDVPKPKEGHHAESRRTWVNPNPQGEQEKDVHRMETIPKPRQHEIDMNTLEVYSMPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPTEKVIVEPASSSRGTNVNPPIRSSVPPPTFAKFFAIASLQQYTNSFSEENLIGGGMLGNVYRAELPNGQLLAVKKLDKRASAHQKDDEFLKLINSIDRIRHANVVELVGYCSEHGQRLLIYEYCSNGSLFDALHSDDDFKTRLSWNSRIRISLGAARALEYLHEQCQPPVVHRNLKSANILLDDDLSVRVSDCGLAPLIASGSVSQLSGNLLTAYGYGAPEFESGIYTYQSDVYSFGVIMLELLTGRPSHDRTRPRGEQFLVRWAVPQLHDIDALSRMVDPSLNGNYPAKSLSNFADIISRCLQSEPEFRPAMSEVVLYLLNMIRKESQQTESNEK* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2436 806 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 30 805 - -
Gso6g2436 806 ProSiteProfiles Protein kinase domain profile. 516 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g2436 806 Pfam Protein tyrosine and serine/threonine kinase 519 788 IPR001245 GO:0004672|GO:0006468
Gso6g2436 806 MobiDBLite consensus disorder prediction 409 425 - -
Gso6g2436 806 MobiDBLite consensus disorder prediction 285 308 - -
Gso6g2436 806 MobiDBLite consensus disorder prediction 256 270 - -
Gso6g2436 806 MobiDBLite consensus disorder prediction 256 314 - -
Gso6g2436 806 MobiDBLite consensus disorder prediction 384 398 - -
Gso6g2436 806 SUPERFAMILY Formin homology 2 domain (FH2 domain) 460 469 - -
Gso6g2436 806 MobiDBLite consensus disorder prediction 346 425 - -
Gso6g2436 806 Gene3D Ribonuclease Inhibitor 46 265 IPR032675 -
Gso6g2436 806 Gene3D Phosphorylase Kinase; domain 1 492 593 - -
Gso6g2436 806 MobiDBLite consensus disorder prediction 464 494 - -
Gso6g2436 806 Pfam Leucine rich repeat 155 214 IPR001611 GO:0005515
Gso6g2436 806 SUPERFAMILY L domain-like 66 247 - -
Gso6g2436 806 Gene3D Transferase(Phosphotransferase) domain 1 594 806 - -
Gso6g2436 806 SUPERFAMILY Protein kinase-like (PK-like) 493 790 IPR011009 -
Gso6g2436 806 PANTHER OS01G0253100 PROTEIN 30 805 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2436 Gso-Chr6 46052354 46059935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2436 37 797 Strubbelig Receptor Gene Family AT4G03390 61.617 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gso6g2436 PK_Tyr_Ser-Thr 8.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2436 - - ahf:112737625 1125.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0888 12 9968131 9975798 Gso6g2436 6 46052354 46059935 GST
Gso12g1710 12 40681416 40688255 Gso6g2436 6 46052354 46059935 PCT
Gso11g3155 11 47416688 47423423 Gso6g2436 6 46052354 46059935 PCT
Gso6g2436 6 46052354 46059935 Gso12g1710 12 40681416 40688255 PCT
Gso6g2436 6 46052354 46059935 Gso11g3155 11 47416688 47423423 PCT