Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2431 ATGGGTTGTTGCATCTCAACAAGCAGTAGGAGTACTTGTAGCAGCAAGAGCAATGGAGATATGGTCTCTCCATCTTGCTTAGAAATTGGATGCTGTGGCCAAAAGAGAACAAGGAGAACATTCTCTGATCATGTTATTTCTCTCCACCATTTACCATCCTTACCTAGCAGAATTTTCTCCAATGGAAAGAGCCGCGGTTCGTGCATATTTACACAGCAGGGCCGCAAGGGTATTAATCAGGATGCCATGATTGTGTGGGAAGATTTCATGTCCGAAGATACTATCTTTTGTGGTGTCTTTGATGGCCATGGTCCACACGGTCATCTAGTCGCGCGCAAAGTGAGGGATGCATTGCCAATTAAGCTAATTTCGTCTTTGCATTCTAATGAATCTAAGCGAAATGGGTCAGGTAAAACTTGCTTCAAAGGGAATGTAAAACCTGATAGTGGAGAATCTGAGAAGGATTGCTCTGCGGAGGATAAACTGAACTCAACATGGAGGGAAGCTTTCATGAAGGCATACAAGGCTATGGACAAAGAGCTCAGGTCTCATCCGAATCTGGATTGCTTCTGTAGTGGGAGCACTGCTGTGACTATAGTGAAGCAGGGTTCAAATCTGTTCATGGGCTATATCGGGGATTCTCGAGCAATCATGGGATCCAAGGATAGCAATGACTCCATGGTGGCTATTCAGTTGACTGTTGATTTAAAGCCTGATTTGCCAAGGGAAGCAGAGAGAATTAAGAAGTGCAGAGGTAGGGTATTTGCTTTGCAAGATGAGCCTGAAGTGCCTAGGGTGTGGTTGCCTTTTGATGATGCGCCGGGATTAGCCATGGCTAGAGCATTTGGTGATTTCTGCTTGAAGGAGTATGGTGTGATTTCTATACCTGAATTTTCTCACCGGCAGCTTACAGACAGAGATCAGTTCATTGTTCTTGCCTCAGATGGGGTGTGGGATGTTTTAAGCAACGAGGAGGTGGTTGAGATAGTATCTTCAGCGCCAACGCGATCATCAGCGGCAAGGATTCTGGTAGATTCTGCTGCTAGGGAGTGGAAACACAAATACCCTACATCAAAGATGGATGACTGTGCTGTAGTATGCTTATTTTTGGATGGGAAAATGGACTCGGAATCTGATTACGAGGAACAAGGCTTTTCTTCTGCAACCATCCAAAGCAACCATTCAGGTAACCCCATTGAGTCAGATGATGGACAAAAATCTGAGCCATCATTGCAAAGGAACTTCACTGTGAGATCCTCAGAGGAAAATGAGGCAAATGGAGCACTATCTGTTGATGTTGTTGAAGATGCAACATCATCAGCTGATGATCAAAACTGGTCAGGTTTGGAAGGGGTCACTCGTGTAAACTCACTTGTCCAACTTCCTAGATTTTCTGAGGAAAGGCCAAAATCTTGA 1416 0.447 MGCCISTSSRSTCSSKSNGDMVSPSCLEIGCCGQKRTRRTFSDHVISLHHLPSLPSRIFSNGKSRGSCIFTQQGRKGINQDAMIVWEDFMSEDTIFCGVFDGHGPHGHLVARKVRDALPIKLISSLHSNESKRNGSGKTCFKGNVKPDSGESEKDCSAEDKLNSTWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAERIKKCRGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRQLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDSAAREWKHKYPTSKMDDCAVVCLFLDGKMDSESDYEEQGFSSATIQSNHSGNPIESDDGQKSEPSLQRNFTVRSSEENEANGALSVDVVEDATSSADDQNWSGLEGVTRVNSLVQLPRFSEERPKS* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2431 471 MobiDBLite consensus disorder prediction 128 156 - -
Gso6g2431 471 MobiDBLite consensus disorder prediction 381 426 - -
Gso6g2431 471 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 459 - -
Gso6g2431 471 MobiDBLite consensus disorder prediction 380 428 - -
Gso6g2431 471 SUPERFAMILY PP2C-like 57 372 IPR036457 -
Gso6g2431 471 MobiDBLite consensus disorder prediction 1 20 - -
Gso6g2431 471 Pfam Protein phosphatase 2C 94 347 IPR001932 -
Gso6g2431 471 CDD PP2Cc 65 370 IPR001932 -
Gso6g2431 471 PANTHER ALPHABET, ISOFORM E-RELATED 1 459 - -
Gso6g2431 471 SMART PP2C_4 50 368 IPR001932 -
Gso6g2431 471 Gene3D - 58 378 IPR036457 -
Gso6g2431 471 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2431 Gso-Chr6 45980563 45983963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2431 1 471 PP2C-type Phosphatase Gene Family AT1G03590 69.811 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2431 - - gmx:100813306 942.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0899 12 10276400 10280180 Gso6g2431 6 45980563 45983963 GST
Gso12g1716 12 40745890 40751024 Gso6g2431 6 45980563 45983963 PCT
Gso11g3149 11 47366227 47368897 Gso6g2431 6 45980563 45983963 PCT
Gso6g2431 6 45980563 45983963 Gso12g1716 12 40745890 40751024 PCT
Gso6g2431 6 45980563 45983963 Gso11g3149 11 47366227 47368897 PCT