Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2419 ATGAAGTTCCTCTTTGTAAAGCTTGTTTCTCAATTGTCTCTAGTCATTCTTTGGTCTTTTGCCACAGTTATTACCTCTCAACATGTTAGTGTTGTGAGTCTACCAAACAATGAAAGTGTCCCAGCAGTGATTGTGTTTGGGGACTCTATAGTGGATACAGGTAACAACAACTACATCAACACCATAGCCAAAGTCAATTTCCTACCATATGGTAAAGATTTTGGTGGAGGAAATCAACCAACCGGGAGGTTCAGCAATGGTTTAACCCCATCAGACATCATTGCTGCAAAATTGGGAGTCAAGAAGCTTTTGCCACCTTATCTTGATCCAAAATTGCAACCTCAAGATCTCCTCACAGGTGTAAGCTTTGCATCTGGTGGCAGCGGATATGATCCTCTAACATCTAAAATTGCATCAGTGCTGTCATTATCAGATCAACTAGACAAGTTCAGGGAATACAAAAACAAGATAAAGGAAACAGTTGGAGGAAACAGAACAACAACAATAATATCAAAAAGCATATACATCTTGTGCACAGGAAGTAATGACATTGCCAATACTTACTCTCTATCACCATTTAGGCGACTACAATATGACATTCAATCATACATAGACTTCATGATTAAACAAGCCACAAACTTCTTGAAAGAACTTTATGGACTAGGAGCTAGAAGGATTGGAGTAATTGGTTTGCCAGTTCTAGGGTGTGTGCCCTTTCAAAGAACAATTCAAGGAGGCATACACAGAGAATGCTCAGATTTTGAAAACCACGCCGCGACGCTCTTCAACAACAAGCTCTCATCCCAAATAGATGCCCTTAAGAAGCAGTTTCCAGAGACCAAATTTGTCTACCTTGAGATTTACAACCCATTACTCAATATGATTCAAAATGCAACTAAATATGGTTTTGAAGTAACAGACAAAGGATGTTGTGGCACAGGAGATTTTGAAGTAGGCTTTTTGTGCAACCGTTTAACGCCGCACATATGTTCAAACACCTCAAGCTACATATTCTGGGACAGTTTCCATCCTACGGAAGAGGGATATAAAGTGCTTTGTTCTCAGGTGCTTGATAAAAATATCAAGGACTTCTTCTAA 1098 0.3944 MKFLFVKLVSQLSLVILWSFATVITSQHVSVVSLPNNESVPAVIVFGDSIVDTGNNNYINTIAKVNFLPYGKDFGGGNQPTGRFSNGLTPSDIIAAKLGVKKLLPPYLDPKLQPQDLLTGVSFASGGSGYDPLTSKIASVLSLSDQLDKFREYKNKIKETVGGNRTTTIISKSIYILCTGSNDIANTYSLSPFRRLQYDIQSYIDFMIKQATNFLKELYGLGARRIGVIGLPVLGCVPFQRTIQGGIHRECSDFENHAATLFNNKLSSQIDALKKQFPETKFVYLEIYNPLLNMIQNATKYGFEVTDKGCCGTGDFEVGFLCNRLTPHICSNTSSYIFWDSFHPTEEGYKVLCSQVLDKNIKDFF* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2419 365 CDD SGNH_plant_lipase_like 41 360 IPR035669 -
Gso6g2419 365 PANTHER GDSL ESTERASE/LIPASE EXL3 2 364 - -
Gso6g2419 365 Gene3D SGNH hydrolase 29 361 IPR036514 -
Gso6g2419 365 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 43 54 IPR008265 GO:0006629|GO:0016298
Gso6g2419 365 SUPERFAMILY SGNH hydrolase 158 358 - -
Gso6g2419 365 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 364 - -
Gso6g2419 365 Pfam GDSL-like Lipase/Acylhydrolase 43 352 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2419 Gso-Chr6 45827999 45829931 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2419 8 363 Pollen Coat Proteome AT1G75910 38.781 9.60e-78 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2419 - - gmx:100808475 724.546