Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2408 ATGGCGAATGTGGCGATTCTTGAGCTCAATGGAAACTGTGGTAATACAGTGGAAGAGATAGTGAAAATGGAGAGAGAGATCTTTCCCGAGCACGAATCACTGACTTCATTCTTTCACGATGAACTTAGAAAGAAGAACAGTGGATTGCTTTATCTTCACGTGGATGGCGAACTTGTAGGCTATGTCATGTATTCTTGGCCTTCTTCCTCGTATGCCACTATCACCGAGCTCGCAGTTAAGGAGCAATGGAGGGGACAAGGCCACGGAGAGGCTTTGTTGAAAGCAGCAATTCAGAAATGCAGTACAAGTAAAGTTTTGCGCATAATGCTTCATGTGGATCCCTTGAGGACTCCTGCAGTGAACCTTTACAAGAAACATGGTTTCCAAGTTGACACATTGGTTGAAGGGTACTACTCCTCAGATAGAAATGCTTATAGAATGTACTTGGACTTCGATTCAAGTTGA 465 0.4366 MANVAILELNGNCGNTVEEIVKMEREIFPEHESLTSFFHDELRKKNSGLLYLHVDGELVGYVMYSWPSSSYATITELAVKEQWRGQGHGEALLKAAIQKCSTSKVLRIMLHVDPLRTPAVNLYKKHGFQVDTLVEGYYSSDRNAYRMYLDFDSS* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2408 154 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 17 151 IPR016181 -
Gso6g2408 154 CDD NAT_SF 55 111 - -
Gso6g2408 154 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 4 152 IPR000182 GO:0016407
Gso6g2408 154 Pfam Acetyltransferase (GNAT) family 20 128 IPR000182 GO:0016407
Gso6g2408 154 Gene3D - 15 150 - -
Gso6g2408 154 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2408 Gso-Chr6 45729161 45747870 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso6g2408 Acetyltransf_1 1.5e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2408 - - gmx:100808645 313.923